EMBL-EBI User Survey 2024

Do data resources managed by EMBL-EBI and our collaborators make a difference to your work?

Please take 10 minutes to fill in our annual user survey, and help us make the case for why sustaining open data resources is critical for life sciences research.

Survey link: https://www.surveymonkey.com/r/HJKYKTT?channel=[webpage]

Ensembl Genomes HomeEnsembl Plants HomeEnsembl Plants Home ▼
More ▼
Search »
Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: Zm00001eb108370_T001

Description

Zm00001e010690

Location

Chromosome 2: 216,029,814-216,041,186 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 20 domains and features, is associated with 520 variant alleles and maps to 19 oligo probes.

Gene

This transcript is a product of gene Zm00001eb108370 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb108370_T0012893618aaZm00001eb108370_P001
 
Protein coding
A0A1D6F081 A0A1D6F082 A0A1D6F083
A0A1D6F090 A0A3L6FPY5 B6SL30
B6SXJ3 		-Ensembl Canonical
-Zm00001eb108370_T0022688302aaZm00001eb108370_P002
 
Protein coding
---
-Zm00001eb108370_T0032665302aaZm00001eb108370_P003
 
Protein coding
A0A1D6F091 A0A1D6F094 A0A1D6IIP8
C0P908 		--
-Zm00001eb108370_T0042267451aaZm00001eb108370_P004
 
Protein coding
---

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,893 bps, Translation length: 618 residues

Version

Zm00001eb108370_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.