EMBL-EBI User Survey 2024

Do data resources managed by EMBL-EBI and our collaborators make a difference to your work?

Please take 10 minutes to fill in our annual user survey, and help us make the case for why sustaining open data resources is critical for life sciences research.

Survey link: https://www.surveymonkey.com/r/HJKYKTT?channel=[webpage]

Ensembl Genomes HomeEnsembl Plants HomeEnsembl Plants Home ▼
More ▼
Search »
Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: Zm00001eb052830_T004

Description

Zm00001e005238

Location

Chromosome 1: 265,942,952-265,945,942 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 418 variant alleles and maps to 33 oligo probes.

Gene

This transcript is a product of gene Zm00001eb052830 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb052830_T0032405349aaZm00001eb052830_P003
 
Protein coding
A0A1D6KZ78 -Ensembl Canonical
-Zm00001eb052830_T0042399349aaZm00001eb052830_P004
 
Protein coding
A0A1D6KZ78 --
-Zm00001eb052830_T0052393345aaZm00001eb052830_P005
 
Protein coding
A0A096QHI7 A0A1D6KZ79 A0A1D6KZ83
A0A317YEI7 B6TX94 		--
-Zm00001eb052830_T0022390345aaZm00001eb052830_P002
 
Protein coding
A0A096QHI7 --
-Zm00001eb052830_T0072209345aaZm00001eb052830_P007
 
Protein coding
A0A096QHI7 --
-Zm00001eb052830_T0011637345aaZm00001eb052830_P001
 
Protein coding
A0A096QHI7 --
-Zm00001eb052830_T0061524349aaZm00001eb052830_P006
 
Protein coding
A0A1D6KZ78 --
-Zm00001eb052830_T0081375345aaZm00001eb052830_P008
 
Protein coding
A0A096QHI7 --

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 2,399 bps, Translation length: 349 residues

Version

Zm00001eb052830_T004

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.