EMBL-EBI User Survey 2024

Do data resources managed by EMBL-EBI and our collaborators make a difference to your work?

Please take 10 minutes to fill in our annual user survey, and help us make the case for why sustaining open data resources is critical for life sciences research.

Survey link: https://www.surveymonkey.com/r/HJKYKTT?channel=[webpage]

Zea mays (Zm-B73-REFERENCE-NAM-5.0)
Description

Zm00001e003567

About this transcript

This transcript has 6 exons, is annotated with 22 domains and features, is associated with 781 variant alleles and maps to 65 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb035320_T0041932376aaZm00001eb035320_P004
 
Protein coding
C0P3P9 -Ensembl Canonical
-Zm00001eb035320_T0031721376aaZm00001eb035320_P003
 
Protein coding
C0P3P9 --
-Zm00001eb035320_T0011662376aaZm00001eb035320_P001
 
Protein coding
C0P3P9 --
-Zm00001eb035320_T0051571376aaZm00001eb035320_P005
 
Protein coding
A0A1D6KJ12 A0A317YD97 B6THC0
C0HFH7 C0P3P9
--
-Zm00001eb035320_T0021548376aaZm00001eb035320_P002
 
Protein coding
C0P3P9 --
-Zm00001eb035320_T0061524376aaZm00001eb035320_P006
 
Protein coding
C0P3P9 --
Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,548 bps, Translation length: 376 residues

Version

Zm00001eb035320_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.