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This track comprises multiple analyses
Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.
Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.
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Coding transcripts only (in coding genes)URL to turn this track on
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Gramene maize AGPv4 coding genes mapped with liftoff
Gramene maize AGPv3 coding genes mapped with liftoff
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Track showing sequence in both directions. Only displayed at 1Kb and below.
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Manually curated AGPv4 gene models with Apollo Annotation Editor
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Manually curated AGPv4 gene models with Apollo Annotation Editor
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Track showing sequence in both directions. Only displayed at 1Kb and below.
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This track comprises multiple analyses
Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.
Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.
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This track comprises multiple analyses
Gramene maize AGPv4 coding genes mapped with liftoff
Gramene maize AGPv3 coding genes mapped with liftoff
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High Confidence lncRNAs
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Track showing underlying assembly contigs.
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High Confidence lncRNAs
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Sequence variants from all sources
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Ensembl Plants release 61 - May 2025 © EMBL-EBI EMBL-EBI
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