Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Zm00001eb001670

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Description

Zm00001e000167

Location

Chromosome 1: 4,932,248-4,948,340 reverse strand.

About this gene

This gene has 6 transcripts (splice variants), 211 orthologues and 76 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	Zm00001eb001670_T006	1563	228aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8J8XYI6 B6T709	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb001670_T004	2071	194aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804LCM6	-
-	Zm00001eb001670_T003	1865	225aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804LCM5	-
-	Zm00001eb001670_T001	1790	200aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804LCM3	-
-	Zm00001eb001670_T002	1742	225aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804LCM5	-
-	Zm00001eb001670_T005	1448	228aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8J8XYI6 B6T709	-

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Variant table

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Variant table

This table shows known variants for this gene. Use the 'Consequence Type' filter to view a subset of these.

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Variant ID	Chr: bp	Alleles	Class	Source	Evidence	Clin. Sig.	Conseq. Type	AA	AA coord	SIFT	Transcript

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