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Zea mays (Zm-B73-REFERENCE-NAM-5.0)
Description

Zm00001e008079

Location
About this gene

This gene has 5 transcripts (splice variants), 200 orthologues and 18 paralogues.

Show/hide columns (1 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
-Zm00001eb082560_T0051088340aa
 
Protein coding
A0A804MFY5 -Ensembl Canonical
-Zm00001eb082560_T0012084325aa
 
Protein coding
A0A804MFY1 --
-Zm00001eb082560_T0032004261aa
 
Protein coding
A0A1D6EAC6 --
-Zm00001eb082560_T0021993275aa
 
Protein coding
A0A1D6EAC4 --
-Zm00001eb082560_T0041317339aa
 
Protein coding
B4FHN3 --

HAMAP

HAMAP families.

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Pfam

Protein domains and motifs from the Pfam database.

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PROSITE patterns

Protein domains and motifs from the PROSITE patterns database.

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PANTHER

PANTHER families.

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SFLD

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PROSITE profiles

Protein domains and motifs from the PROSITE profiles database.

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CDD

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Superfamily

Protein domains and motifs from the SUPERFAMILY database.

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Gene3D

CATH/Gene3D families.

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SFLD

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NCBIFAM

NCBIfam is a collection of protein families based on Hidden Markov Models (HMMs).

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TIGRFAM

Protein domains and motifs from the TIGRFAM database.

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TIGRFAM

Protein domains and motifs from the TIGRFAM database.

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HAMAP

HAMAP families.

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SMART

Protein domains and motifs from the SMART database.

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NCBIFAM

NCBIfam is a collection of protein families based on Hidden Markov Models (HMMs).

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Prints

Protein fingerprints (groups of conserved motifs) from the PRINTS database.

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CDD

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PIRSF

Protein domains and motifs from the PIR (Protein Information Resource) Superfamily database.

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PIRSF

Protein domains and motifs from the PIR (Protein Information Resource) Superfamily database.

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SMART

Protein domains and motifs from the SMART database.

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CDD

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TIGRFAM

Protein domains and motifs from the TIGRFAM database.

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TIGRFAM

Protein domains and motifs from the TIGRFAM database.

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SFLD

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SMART

Protein domains and motifs from the SMART database.

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NCBIFAM

NCBIfam is a collection of protein families based on Hidden Markov Models (HMMs).

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PROSITE profiles

Protein domains and motifs from the PROSITE profiles database.

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Prints

Protein fingerprints (groups of conserved motifs) from the PRINTS database.

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CDD

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HAMAP

HAMAP families.

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NCBIFAM

NCBIfam is a collection of protein families based on Hidden Markov Models (HMMs).

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Superfamily

Protein domains and motifs from the SUPERFAMILY database.

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SFLD

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Pfam

Protein domains and motifs from the Pfam database.

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PIRSF

Protein domains and motifs from the PIR (Protein Information Resource) Superfamily database.

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PANTHER

PANTHER families.

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PROSITE patterns

Protein domains and motifs from the PROSITE patterns database.

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SMART

Protein domains and motifs from the SMART database.

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PIRSF

Protein domains and motifs from the PIR (Protein Information Resource) Superfamily database.

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Gene3D

CATH/Gene3D families.

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HAMAP

HAMAP families.

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PANTHER

PANTHER families.

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Gene3D

CATH/Gene3D families.

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PROSITE profiles

Protein domains and motifs from the PROSITE profiles database.

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NCBIFAM

NCBIfam is a collection of protein families based on Hidden Markov Models (HMMs).

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CDD

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Prints

Protein fingerprints (groups of conserved motifs) from the PRINTS database.

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PIRSF

Protein domains and motifs from the PIR (Protein Information Resource) Superfamily database.

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Pfam

Protein domains and motifs from the Pfam database.

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SFLD

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PROSITE patterns

Protein domains and motifs from the PROSITE patterns database.

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SFLD

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PIRSF

Protein domains and motifs from the PIR (Protein Information Resource) Superfamily database.

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HAMAP

HAMAP families.

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TIGRFAM

Protein domains and motifs from the TIGRFAM database.

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HAMAP

HAMAP families.

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NCBIFAM

NCBIfam is a collection of protein families based on Hidden Markov Models (HMMs).

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TIGRFAM

Protein domains and motifs from the TIGRFAM database.

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SMART

Protein domains and motifs from the SMART database.

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Superfamily

Protein domains and motifs from the SUPERFAMILY database.

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SMART

Protein domains and motifs from the SMART database.

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CDD

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SFLD

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Gene3D

CATH/Gene3D families.

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SMART

Protein domains and motifs from the SMART database.

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CDD

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Superfamily

Protein domains and motifs from the SUPERFAMILY database.

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SMART

Protein domains and motifs from the SMART database.

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PIRSF

Protein domains and motifs from the PIR (Protein Information Resource) Superfamily database.

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PROSITE patterns

Protein domains and motifs from the PROSITE patterns database.

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Prints

Protein fingerprints (groups of conserved motifs) from the PRINTS database.

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Pfam

Protein domains and motifs from the Pfam database.

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PROSITE profiles

Protein domains and motifs from the PROSITE profiles database.

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PANTHER

PANTHER families.

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PIRSF

Protein domains and motifs from the PIR (Protein Information Resource) Superfamily database.

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HAMAP

HAMAP families.

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TIGRFAM

Protein domains and motifs from the TIGRFAM database.

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TIGRFAM

Protein domains and motifs from the TIGRFAM database.

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CDD

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NCBIFAM

NCBIfam is a collection of protein families based on Hidden Markov Models (HMMs).

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NCBIFAM

NCBIfam is a collection of protein families based on Hidden Markov Models (HMMs).

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HAMAP

HAMAP families.

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SFLD

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HAMAP

HAMAP families.

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PROSITE profiles

Protein domains and motifs from the PROSITE profiles database.

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SFLD

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Gene3D

CATH/Gene3D families.

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PIRSF

Protein domains and motifs from the PIR (Protein Information Resource) Superfamily database.

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PROSITE patterns

Protein domains and motifs from the PROSITE patterns database.

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SMART

Protein domains and motifs from the SMART database.

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HAMAP

HAMAP families.

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Prints

Protein fingerprints (groups of conserved motifs) from the PRINTS database.

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PIRSF

Protein domains and motifs from the PIR (Protein Information Resource) Superfamily database.

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TIGRFAM

Protein domains and motifs from the TIGRFAM database.

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CDD

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PANTHER

PANTHER families.

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SFLD

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NCBIFAM

NCBIfam is a collection of protein families based on Hidden Markov Models (HMMs).

URL to turn this track on

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Pfam

Protein domains and motifs from the Pfam database.

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SMART

Protein domains and motifs from the SMART database.

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CDD

URL to turn this track on

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TIGRFAM

Protein domains and motifs from the TIGRFAM database.

URL to turn this track on

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NCBIFAM

NCBIfam is a collection of protein families based on Hidden Markov Models (HMMs).

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

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Superfamily

Protein domains and motifs from the SUPERFAMILY database.

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Gene3D

CATH/Gene3D families.

URL to turn this track on

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PANTHER

PANTHER families.

URL to turn this track on

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Click on the star to add/remove this track from your favourites

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PROSITE patterns

Protein domains and motifs from the PROSITE patterns database.

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PROSITE profiles

Protein domains and motifs from the PROSITE profiles database.

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Pfam

Protein domains and motifs from the Pfam database.

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Prints

Protein fingerprints (groups of conserved motifs) from the PRINTS database.

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Superfamily

Protein domains and motifs from the SUPERFAMILY database.

URL to turn this track on

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Click on the star to add/remove this track from your favourites

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Gene3D

CATH/Gene3D families.

URL to turn this track on

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Click on the star to add/remove this track from your favourites

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PANTHER

PANTHER families.

URL to turn this track on

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Click on the star to add/remove this track from your favourites

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PROSITE patterns

Protein domains and motifs from the PROSITE patterns database.

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PROSITE profiles

Protein domains and motifs from the PROSITE profiles database.

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Pfam

Protein domains and motifs from the Pfam database.

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Prints

Protein fingerprints (groups of conserved motifs) from the PRINTS database.

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Click on the star to add/remove this track from your favourites

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Superfamily

Protein domains and motifs from the SUPERFAMILY database.

URL to turn this track on

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Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Gene3D

CATH/Gene3D families.

URL to turn this track on

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PANTHER

PANTHER families.

URL to turn this track on

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PROSITE patterns

Protein domains and motifs from the PROSITE patterns database.

URL to turn this track on

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PROSITE profiles

Protein domains and motifs from the PROSITE profiles database.

URL to turn this track on

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Pfam

Protein domains and motifs from the Pfam database.

URL to turn this track on

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Prints

Protein fingerprints (groups of conserved motifs) from the PRINTS database.

URL to turn this track on

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Superfamily

Protein domains and motifs from the SUPERFAMILY database.

URL to turn this track on

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Gene3D

CATH/Gene3D families.

URL to turn this track on

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Click on the star to add/remove this track from your favourites

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PANTHER

PANTHER families.

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

PROSITE patterns

Protein domains and motifs from the PROSITE patterns database.

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

PROSITE profiles

Protein domains and motifs from the PROSITE profiles database.

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Pfam

Protein domains and motifs from the Pfam database.

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Prints

Protein fingerprints (groups of conserved motifs) from the PRINTS database.

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Superfamily

Protein domains and motifs from the SUPERFAMILY database.

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Gene3D

CATH/Gene3D families.

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

PANTHER

PANTHER families.

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

PROSITE patterns

Protein domains and motifs from the PROSITE patterns database.

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

PROSITE profiles

Protein domains and motifs from the PROSITE profiles database.

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Pfam

Protein domains and motifs from the Pfam database.

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Prints

Protein fingerprints (groups of conserved motifs) from the PRINTS database.

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Superfamily

Protein domains and motifs from the SUPERFAMILY database.

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Configuring the display

Tip: use the 'Configure this page' link on the left to customise the protein domains and types of variants displayed above.
Please note the default 'Context' settings will probably filter out some intronic SNPs.
None of the variants are filtered out by the Source, Class and Type filters.
None of the intronic variants are removed by the Context filter.

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