Zea mays (Zm-B73-REFERENCE-NAM-5.0)
Description

Zm00001e001562

Location
About this gene

This gene has 3 transcripts (splice variants) and 45 orthologues.

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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-Zm00001eb015850_T0012066530aa
 
Protein coding
A0A804LJQ2 Ensembl Canonical
-Zm00001eb015850_T0022050529aa
 
Protein coding
A0A804LJQ3 -
-Zm00001eb015850_T0031652426aa
 
Protein coding
A0A1D6K1V3 -
Gene type

Protein coding

Annotation method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Non-coding genes annotated by CSHL

This track comprises multiple analyses

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

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Contigs

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Non-coding genes annotated by CSHL

This track comprises multiple analyses

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

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