Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Homoeologues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TRIDC4AG016430

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Description

Protein SHORT ROOT IN SALT MEDIUM 1 [Source:Projected from Arabidopsis thaliana (AT2G03150) UniProtKB/Swiss-Prot;Acc:F4IS91]

Location

Chromosome 4A: 145,742,637-145,756,621 forward strand.

About this gene

This gene has 13 transcripts (splice variants) and 139 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	Flags
-	TRIDC4AG016430.1	4488	1320aa	TRIDC4AG016430.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	TRIDC4AG016430.2	4563	616aa	TRIDC4AG016430.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC4AG016430.5	4493	1066aa	TRIDC4AG016430.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC4AG016430.3	4398	1313aa	TRIDC4AG016430.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC4AG016430.6	4093	596aa	TRIDC4AG016430.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC4AG016430.12	3763	1066aa	TRIDC4AG016430.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC4AG016430.4	3649	613aa	TRIDC4AG016430.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC4AG016430.7	3420	822aa	TRIDC4AG016430.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC4AG016430.9	3365	1121aa	TRIDC4AG016430.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC4AG016430.10	3358	1119aa	TRIDC4AG016430.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC4AG016430.11	2780	779aa	TRIDC4AG016430.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC4AG016430.8	2766	731aa	TRIDC4AG016430.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC4AG016430.13	629	209aa	TRIDC4AG016430.13	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data