Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TraesCS1D02G003900

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Location

Chromosome 1D: 2,076,917-2,080,837 reverse strand.

About this gene

This gene has 6 transcripts (splice variants), 53 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	TraesCS1D02G003900.3	2411	477aa	TraesCS1D02G003900.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5ZMJ8 A0A9R1DIQ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	TraesCS1D02G003900.5	2408	476aa	TraesCS1D02G003900.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5ZM48 A0A9R1DJ79	-
-	TraesCS1D02G003900.6	2408	476aa	TraesCS1D02G003900.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5ZM71 A0A9R1DIX8	-
-	TraesCS1D02G003900.2	2405	475aa	TraesCS1D02G003900.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5ZND1 A0A9R1DIY5	-
-	TraesCS1D02G003900.4	2405	475aa	TraesCS1D02G003900.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5ZNS4 A0A9R1DJ07	-
-	TraesCS1D02G003900.1	1618	446aa	TraesCS1D02G003900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5ZM65 A0A9R1ITX3	-

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Paralogues

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Personal Data