Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Homoeologues
- Cultivars
  - Gene tree
  - Orthologues
  - Paralogues
  - Homoeologues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TraesCS1A02G171100

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Location

Chromosome 1A: 306,106,802-306,115,293 forward strand.

About this gene

This gene has 9 transcripts (splice variants) and 172 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	TraesCS1A02G171100.3	3326	899aa	TraesCS1A02G171100.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5XYW4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	TraesCS1A02G171100.4	3323	898aa	TraesCS1A02G171100.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5XYX8	-
-	TraesCS1A02G171100.5	3305	892aa	TraesCS1A02G171100.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5XZR4	-
-	TraesCS1A02G171100.1	3302	891aa	TraesCS1A02G171100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5XYM4	-
-	TraesCS1A02G171100.2	3239	870aa	TraesCS1A02G171100.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5XYL8	-
-	TraesCS1A02G171100.7	2590	731aa	TraesCS1A02G171100.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5XYM3	-
-	TraesCS1A02G171100.6	2587	730aa	TraesCS1A02G171100.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5XYM7	-
-	TraesCS1A02G171100.9	2098	567aa	TraesCS1A02G171100.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5XYY3	-
-	TraesCS1A02G171100.8	2095	566aa	TraesCS1A02G171100.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5XYW9	-

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Orthologues

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