Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Homoeologues
- Cultivars
  - Gene tree
  - Orthologues
  - Paralogues
  - Homoeologues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TraesCS6D02G193900

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Description

CCAAT-binding factor [Source:Projected from Arabidopsis thaliana (AT1G72440) UniProtKB/TrEMBL;Acc:F4IDC2]

Location

Chromosome 6D: 269,116,960-269,129,369 reverse strand.

About this gene

This gene has 3 transcripts (splice variants) and 157 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	TraesCS6D02G193900.1	4183	1080aa	TraesCS6D02G193900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B6QEJ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	TraesCS6D02G193900.2	4171	790aa	TraesCS6D02G193900.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B6QHI0	-
-	TraesCS6D02G193900.3	4111	931aa	TraesCS6D02G193900.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B6QHH8	-

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Cultivars

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data