Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TraesCS5D02G118400

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Description

Pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Source:Projected from Arabidopsis thaliana (AT1G71460) UniProtKB/Swiss-Prot;Acc:Q9C9I3]

Location

Chromosome 5D: 158,170,738-158,172,953 reverse strand.

About this gene

This gene has 1 transcript (splice variant), 135 orthologues and 546 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	TraesCS5D02G118400.1	2216	686aa	TraesCS5D02G118400.1.cds1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B6MPD2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Cultivars

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data