Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TraesCS5A02G453700

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Description

Cleavage and polyadenylation specificity factor subunit 2 [Source:UniProtKB/TrEMBL;Acc:A0A341V906]

Location

Chromosome 5A: 635,269,596-635,276,561 reverse strand.

About this gene

This gene has 6 transcripts (splice variants), 173 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	TraesCS5A02G453700.5	2671	739aa	TraesCS5A02G453700.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B6KP50	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	TraesCS5A02G453700.4	2668	738aa	TraesCS5A02G453700.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B6KPU3	-
-	TraesCS5A02G453700.1	2638	728aa	TraesCS5A02G453700.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B6KRJ2	-
-	TraesCS5A02G453700.3	2506	684aa	TraesCS5A02G453700.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B6KRU2	-
-	TraesCS5A02G453700.2	2503	683aa	TraesCS5A02G453700.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B6KS92	-
-	TraesCS5A02G453700.6	1533	468aa	TraesCS5A02G453700.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B6KRJ7	-

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Cultivars

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data