Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TraesCS4D02G039400

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Description

At1g77720 [Source:Projected from Arabidopsis thaliana (AT1G77720) UniProtKB/TrEMBL;Acc:Q84VX4]

Location

Chromosome 4D: 16,813,632-16,819,953 forward strand.

About this gene

This gene has 3 transcripts (splice variants), 175 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	TraesCS4D02G039400.1	3167	779aa	TraesCS4D02G039400.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3NM63 W5EPR4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	TraesCS4D02G039400.2	3089	753aa	TraesCS4D02G039400.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5Y741	-
-	TraesCS4D02G039400.3	2900	690aa	TraesCS4D02G039400.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341U9G9	-

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Cultivars

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data