Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: LSM4 TraesCS3A02G175900

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Description

LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:UniProtKB Gene Name;Acc:A0A077RW01]

Location

Chromosome 3A: 196,195,769-196,200,076 reverse strand.

About this gene

This gene has 1 transcript (splice variant), 182 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
LSM4-201	TraesCS3A02G175900.1	980	143aa	TraesCS3A02G175900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A077RW01	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Cultivars

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data