Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
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- Orthologues
- Paralogues
- Homoeologues
- Cultivars
  - Gene tree
  - Orthologues
  - Paralogues
  - Homoeologues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Gene expression
Pathway
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ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: LSM5 TraesCS1D02G242900

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Description

LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:UniProtKB Gene Name;Acc:W5ACG7]

Location

Chromosome 1D: 333,003,327-333,005,548 reverse strand.

About this gene

This gene has 1 transcript (splice variant) and 149 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
LSM5-201	TraesCS1D02G242900.1	727	89aa	TraesCS1D02G242900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W5ACG7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Cultivars

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data