Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TraesCS1B02G161400

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Description

CHR20 [Source:Projected from Arabidopsis thaliana (AT1G08600) UniProtKB/TrEMBL;Acc:A0A178VZQ9]

Location

Chromosome 1B: 278,459,816-278,481,939 forward strand.

About this gene

This gene has 5 transcripts (splice variants), 148 orthologues and 38 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	TraesCS1B02G161400.5	5026	1587aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5YWH1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	TraesCS1B02G161400.2	4999	1497aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5YW88	-
-	TraesCS1B02G161400.3	4987	1493aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5YV43	-
-	TraesCS1B02G161400.1	4912	1468aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5YVH9	-
-	TraesCS1B02G161400.4	4843	1445aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5YV31	-

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Cultivars

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data