Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TraesCS1A02G279500

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Description

LSD1-type zinc finger protein [Source:UniProtKB/TrEMBL;Acc:A5HSI2]

Location

Chromosome 1A: 476,908,622-476,911,179 forward strand.

About this gene

This gene has 3 transcripts (splice variants), 152 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	TraesCS1A02G279500.3	1116	146aa	TraesCS1A02G279500.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9R1DEZ9 A5HSI2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	TraesCS1A02G279500.2	844	142aa	TraesCS1A02G279500.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5Y2T3	-
-	TraesCS1A02G279500.1	739	107aa	TraesCS1A02G279500.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5Y2Q8	-

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Wheat cultivars

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Gene tree

Orthologues

Paralogues

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data