Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: TraesCS4D02G039400

.

Description

At1g77720 [Source:Projected from Arabidopsis thaliana (AT1G77720) UniProtKB/TrEMBL;Acc:Q84VX4]

Location

Chromosome 4D: 16,813,632-16,819,953 forward strand.

About this gene

This gene has 3 transcripts (splice variants), 186 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	TraesCS4D02G039400.1	3167	779aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B6JFA3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	TraesCS4D02G039400.2	3089	753aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B6JFN7	-
-	TraesCS4D02G039400.3	2900	690aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B6JDH0	-

.

Plant Compara

.

Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data