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Trifolium pratense (Trpr) ▼

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The red clover genome is a joint effort of TGAC and IBERS. This work was funded by an Institute Programme Grant to IBERS (BB/J004405/1) from the Biotechnology and Biological Sciences Research Council (BBSRC), by the ERANET Plant Genomics programme (ERAPG038A-TRANSLEG) and by a Capacity, Capability Challenge Programme from TGAC.

About Trifolium pratense

Red clover (Trifolium pratense) is one of the most important forage legume crops in temperate agriculture, and a key component of sustainable intensification of livestock farming systems. Red clover is a highly heterozygous diploid (2n = 14) species due to its gametophytic self-incompatibility system. This assembly provides a chromosome-scale reference draft genome for a red clover genotype of the variety Milvus (Milvus B).

Taxonomy ID 57577

Data source Earlham Institute

More information and statistics

View karyotypeExample region

Genome assembly: Trpr

More information and statistics

Download DNA sequence (FASTA)

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Example geneExample transcript

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

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Example gene tree

Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Phylogenetic overview of gene families

Download alignments (EMF)

Variation

This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor