Theobroma cacao Belizian Criollo B97-61/B2 (Criollo_cocoa_genome_V2) ▼ 
Summary
Splice variantsTranscript comparisonGene allelesSequenceSecondary StructureGene familiesLiteraturePlant ComparaGenomic alignmentsGene treeGene gain/loss treeOrthologuesParaloguesPan-taxonomic ComparaGene TreeOrthologuesOntologiesGO: Anatomical entityPhenotypesGenetic VariationVariant tableVariant imageStructural variantsGene expressionPathwayMolecular interactionsExternal referencesSupporting evidenceID HistoryGene history.
Splicing factor Prp18 family protein isoform 1
Chromosome I: 29,594,595-29,597,480 reverse strand.
This gene has 1 transcript (splice variant).
| Name | Transcript ID | bp | Protein | Biotype | UniProt | Flags |
|---|---|---|---|---|---|---|
| - | Tc01v2_t023070.1 | 1579 | 415aa | Protein coding | A0A061DXM4 A0AB32VSQ7 | Ensembl Canonical, |
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>chromosome:Criollo_cocoa_genome_V2:I:29593995:29598080:-1 AGATTCTTGTAAATTTTAATCTAATTCAAAGAAAAATGAAAATGTAAACTATAGTTATGA TAGAGAGATCAGAGAGCATACTGTAACCCATGATACGTTTGCCGGGGCCTTCAGCTACAT GAAAATAATCGGGCCATCGAGCTAAATAGGTCATGTAGAATGACATGTTAAACTGTGAAA ATCAAAAAATTTCGATTAATGGAAACAATTTAGAACTCGTCAGAGCATTGTTCGAACTTT TTAAAAATAAAAGGAAAAGAGTTAAAAAGCTTACTGTTTCGGTTAAGTGGTCGAGGTTGA CGGAAGCGAAACGAAGAAGATCATTGCAGCAAAATCTGCGAATCGTCGTCATATCTCTCC TCGCTCTTCTCTCCGTCTCGGGCTGGCGGGACTGGAGGAAGCTTTATGAAACGCAGGGCA GCAGAATCGTGGTTCGGAAGTCAATCTGGCACGCTGTAAGAAAAGTAGGTTCTTTGGATT CTATCCCCGTGGGCGTTAATGGACTCAATTGGGCCATGTAGGTCACATGGTTGGTTTGGA CTAGGAATCCAATAACTTCTCTCCTGGCCAAATTTTACAATTTATAATTTGGGCCTACCC GGGTCTATTTCAATGTCCACCGGGAAGTCAATAACCGAAACAAAACGACCGCCGGTTGAT CCACCCTTACAGTCATCATAATCTTTGTCGAATCTCAAACCTAGTTCAGGCCTCGGACAA TACTGTAATCAAACCCTAGAGATGGATCTCCTCAAACAAGAACTTCTTAAGAAACGGCAG AGCCTAGCTCAGGAGACCGGCGGCAGGCGCGTCTTCAAACGATCCGAAATGGAACAAAAG CAAATCCAAAAGCTTCGCGAGCAAGAGAAACGCGAACTCGAAGCTAAATCTCGCCGCCAA TCCACCACATCCTCCTCCACCACCAACGCCACTTCCGCCAAATCAAATCCCTCCGCTTCC AGCACGGCATCCACGACCGCAACTTCCACCGCCGGTTCCTCCAAATCCCTCACCGATGAA CAAAACATCGACAACCTCGACCTTCCAAGGCAAGAAGTCATCCGGCGCCTCCGCTTCCTC AAACAGCCAATCACTCTCTTTGGCGAAGACGACGCAGCTCGTCTTGACAGGTTAAAATAC GTCTTAAAAGCCGGGCTTTTCGAGGTTGATAGCGATATGACCGAGGGTCAAACCAATGAT TTCTTGAGAGACATTGCGGAGCTGCGGAAGCGGCAGAAGACGGGGATGTTGAGCGAGAGG AAGAGAAAGGATAGGGAAGAAGGGGGAGGAGGAGAGGATGGGGAAGGAGGCGGAGGAGAA GAGGAGTTGAGTGGTGATGGTGGGTCCAGTGGAGTCGATATGGATAAGGATTTGAAAAGA ATGAAGGCGAATTTCGATGAGTTATGTGATGAAGATAAGATTCTGGTGTTTTTCAAGAGG TTGTTGAATGAGTGGAACCAGGAGCTGGATGAGATGGGTGAGGCTGAGAAGAGGACTGCG AAAGGGAAGTCCATGGTCGCCACGTTCAAGCAGTGCGCCCGGTATTTAAATCCGTTGTTC AAGTTTTGTCGGAAGAAGGTAAGTTATTTTTGATGATTTAAAAGATTTCACTTTTTTGAA TCTTTTTTGTTTAATGTTAACTTGTTAAATGGTAGAGAATAGGAGCTCTAAGTTAAAGAA TTGAAATTTTCCTTGAAATGAAAATGGAATCATTGAGAATGAGTGATTAAAACCAGTTAT TAGAAATCGAGATGGGAGGTACAAGACTCTTATTTGCCTGTAAAAATGACTTTGTTCAAC ATTGTGAGATGTTCTGTTCTGTCTGCTAAATCTATGGGGCTAGAGATGTATGAGATTGTA GAAAGCAATGGGTTGAACCATAGCTACTATGTGGTAGCTACAGTTGCCCTTCTCTTGAAT TCAAGTTGGAATGTTTGTGATCAAAGTGGTGACCGGTATCTGAATATCTTTGGATATTTA TGAGGGTTATTAAATTCATCCTCATATTCTTAGTAGAATCACCAGTCTTTTTGTAATGAA ATACATTTAGGCAGAGTTTATCTACCAGTCTCTCACTAATTTTTTTTTTTTTTAGATTTA TTCCCTTTAAGCACTCAAATAGCTGCTAGGGGTGGGGAACTTGGAAGAAAGAAAGAACAA GCTCTGAATCTACCAGCACCAAATCATGTTGATGATCTGTAAATTCTGATTTTGCTGAAT GTGGGTTCTAGGCTAATTGAGAGAGTTTTTAACTTGTTAATGTGGTAAAAAGTTCAAATA ACATCTAACATAGGTATTAGCTGATTAATTGCTCATGAAAAATGTTTTTAGGTGATATTT TGTTAAACAGGCAATTAACTGTCTAATCAGATAGGAGATTCATCTTATATGAAGGTTATG TCAACCATGTTGCACAGCTCAATTATCTTATTTTTACTGTCTGCTTTCTAGTCGATTTAA AGCCAAAGCATGTTCTACAGCTTTCGTCTGGGTGGATTGCTCCCTGTTGCTGATAAATTG AAGTCACCAAGTAAACCTGTAGTTTCTCTTCCGTAATTGAATGTTTTACTTTTAAGCTCT GAAAGCACATGCTCCTTCAGTATGATTCATTCACAAGATGACTCTCATGCTGTGCTGGAT GTTATGAAGTTATCACTCTAACATATGACTGAGTGCCAATGCTATGAACATGTATATTAT CAATTAAAAGTGTTCCCTTCTCTCTGACAAAGTAAAAATAAAGTGAAGACATTGCACTAT GTACTTGGGTATCCTCTCTCTCTGTGTATCAACATCTGCACGTCTGTGTGTGTGTGTGTT TGACTTTGCTCAGAGAACTTTGCATTTATGAAACCCCATATTTAATTGTTATGTTCTAAT GACAGGTTCTTCCAGATGATATCTGTCAAGCATTGTTGGTAGTGGTTGAGTGCTGCATGA AGCGGGACTACCTGGCTGCAATGGATCAGTACATTAAGTTAGCTATTGGTAATGCACCCT GGCCAATTGGTGTCACGATGGTTGGTATCCATGAACGTTCAGCTCGTGAGAAGATCTACA CTAATAGTGTTGCCCACATAATGAATGATGAGACAACTCGCAAATACTTGCAGTCGGTCA AAAGATTAATGACCTTTTGCCAACGACGTTATCCCACCCTTCCATCTAAAGCAGTTGAGT TCAACAGTTTGGCTAATGGCAGCGACTTACAGTCACTGCTAGCAGAAGAGAAGGTTTCTG GGGGTAGTTCCTCAGATGACAGGCTTAGGTTAATGCCTGCTCCAAAGGAAAGCTAGTTAT CATTTGCATGATGTTTTATGTAAACAATATGCTTGAACGTGTTACTGTTAAGAACACATC ATGGCTAGACTCAGGGAAGCATTGTTTAGAACTATATATATATGAAAAATTTAGTTTAGT TTTAGTTAACGGAAGCTATATATATGAAAAATTTCCAACTGTAACATATGGAAATTTTTG AGTGTCTCTGGAAGCTCTTTCATTTTTTGGACGCAATGCAAGAGCAGAGCAAAGCTTATT GAAGTATGTAAGACCAACCACGGTGTAAAGCACTAGCTATCGCACCAAAGATACCACAGA GAAAAAAGCTAGAATTGCTGACGCTTGTTTCTCGCCAATATAAATTAAGGTAGGACTTAT TACCGCGTGTACGGTGGGATGGGTACTAAAAGAAAAGAAATTTATCGGATATGAAAAAAG TGAGTACTAGACTTGGCTAAGACCAAGCATCAAAATCAAGCATCCTATTGGTCCAAGTAA TATCAACTTATCCAAAGATCCAAATCCAAACACCGCCACCTGTCTAAAATCATCCTCTTT CGTAATCCATCACACAAATCTCCAAGCCAAAGCTCTCCACAAACACCAACAAAAACAAAC TCCTACTGCACCTCAACATCCATCATCTACATCGCCATGGCAACGCAAGCAGGCCTCTTC ACCCCCACAATCAGCACCCCGAAATCCCTGGTGCCATGGAAGCCATCCTCGTCATTTTCA TTCGCTACCCCCAAGTCCCTCAACCTCTCCATGGCTCACAGTACCATTAGGGCTGCAGCT GCAGAC
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Ensembl Plants release 62 - September 2025 © EMBL-EBI EMBL-EBI
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