Theobroma cacao Matina 1-6 (Theobroma_cacao_20110822)
Description

Domain of unknown function (DUF1767) [Source:Projected from Arabidopsis thaliana (AT5G19950) TAIR;Acc:AT5G19950]

Location
About this transcript

This transcript has 6 exons and is annotated with 17 domains and features.

Gene

This transcript is a product of gene TCM_037953 Show transcript tableHide transcript table

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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
-EOY309072353457aa
 
Protein coding
A0A061GP19 -Ensembl Canonical
-EOY309081358301aa
 
Protein coding
A0A061GNC6 --
Variants
  • loading
Markup
  • loaded
                                                                          
     1 TCATGTCCGAAACGAATCGACCCCTTTTTATTACTCTGCGACGCAAAATCAAAGGCGCTA     60
       ..ATGTCCGAAACGAATCGACCCCTTTTTATTACTCTGCGACGCAAAATCAAAGGCGCTA     58
       ..-M--S--E--T--N--R--P--L--F--I--T--L--R--R--K--I--K--G--A--     19

                                                                          
    61 AAGAACCAAATATGGAGGAGAGCACGACTTCTGCTTCTACTGAAGCTGTCGTAGAAGCCC    120
    59 AAGAACCAAATATGGAGGAGAGCACGACTTCTGCTTCTACTGAAGCTGTCGTAGAAGCCC    118
    20 K--E--P--N--M--E--E--S--T--T--S--A--S--T--E--A--V--V--E--A--     39

                                                                          
   121 TAGGGGCCAGAGGCTGGTGTTTCGGCGATTGGGACCAAGTCAAAGCTCTCATAGTAATAC    180
   119 TAGGGGCCAGAGGCTGGTGTTTCGGCGATTGGGACCAAGTCAAAGCTCTCATAGTAATAC    178
    40 L--G--A--R--G--W--C--F--G--D--W--D--Q--V--K--A--L--I--V--I--     59

                                                                          
   181 ACACCGCTTTATCCGACGATGTGGGCACTTGTTTCGTCGCCGATTTGGTTGAATCGGAGC    240
   179 ACACCGCTTTATCCGACGATGTGGGCACTTGTTTCGTCGCCGATTTGGTTGAATCGGAGC    238
    60 H--T--A--L--S--D--D--V--G--T--C--F--V--A--D--L--V--E--S--E--     79

                                                                          
   241 TCGTTAACATGGACCTTAGATCCATCGGAGGCAAATCCTTACCCGAACCGAACCTCCGAA    300
   239 TCGTTAACATGGACCTTAGATCCATCGGAGGCAAATCCTTACCCGAACCGAACCTCCGAA    298
    80 L--V--N--M--D--L--R--S--I--G--G--K--S--L--P--E--P--N--L--R--     99

                                                                          
   301 AATCTTCATTTGTTGTTGGTCCCAAAGTCCTCCAGATTTCGTCAGTAAGGGACATATCTA    360
   299 AATCTTCATTTGTTGTTGGTCCCAAAGTCCTCCAGATTTCGTCAGTAAGGGACATATCTA    358
   100 K--S--S--F--V--V--G--P--K--V--L--Q--I--S--S--V--R--D--I--S--    119

                                                                          
   361 GAAGCAGCATATCCGAATTTTCGGGGAATTCGAGTAGTTTACGTTTGCTGAGATTGTGTC    420
   359 GAAGCAGCATATCCGAATTTTCGGGGAATTCGAGTAGTTTACGTTTGCTGAGATTGTGTC    418
   120 R--S--S--I--S--E--F--S--G--N--S--S--S--L--R--L--L--R--L--C--    139

                                                                          
   421 TTACCGATGGACATAGTGAGATAACTGCCATTGAGTTCTCTCATGTTCCAGCAATTCCCG    480
   419 TTACCGATGGACATAGTGAGATAACTGCCATTGAGTTCTCTCATGTTCCAGCAATTCCCG    478
   140 L--T--D--G--H--S--E--I--T--A--I--E--F--S--H--V--P--A--I--P--    159

                                                                          
   481 ACAATGTGGTTCCTGGTACTAAGATTCGTTTGGAAAATAAAGCCATCATACATGGTGGCA    540
   479 ACAATGTGGTTCCTGGTACTAAGATTCGTTTGGAAAATAAAGCCATCATACATGGTGGCA    538
   160 D--N--V--V--P--G--T--K--I--R--L--E--N--K--A--I--I--H--G--G--    179

                                                                          
   541 TATTATGTTTGAACCCTAAAGTGGTAAGTTTGTTAGGCGGTGTTGTTCAATCGCTTTATG    600
   539 TATTATGTTTGAACCCTAAAGTGGTAAGTTTGTTAGGCGGTGTTGTTCAATCGCTTTATG    598
   180 I--L--C--L--N--P--K--V--V--S--L--L--G--G--V--V--Q--S--L--Y--    199

                                                                          
   601 AAGAGTGGGAGATGAACCAAAAATATTCAGGTTTCTCCCGTTCATCATTAAGGTCATCTC    660
   599 AAGAGTGGGAGATGAACCAAAAATATTCAGGTTTCTCCCGTTCATCATTAAGGTCATCTC    658
   200 E--E--W--E--M--N--Q--K--Y--S--G--F--S--R--S--S--L--R--S--S--    219

                                                                          
   661 AAAGTGGTACTGGCGGTCCTCCCCCATTTGAGAAGTTGCAAATCGAGGCACCTTCGAGCG    720
   659 AAAGTGGTACTGGCGGTCCTCCCCCATTTGAGAAGTTGCAAATCGAGGCACCTTCGAGCG    718
   220 Q--S--G--T--G--G--P--P--P--F--E--K--L--Q--I--E--A--P--S--S--    239

                                                                          
   721 GTAGGCTTGTCCAACAAGGCAGATCATCTCACCCTGAGTCCACATTGAAGACTGCTGGAC    780
   719 GTAGGCTTGTCCAACAAGGCAGATCATCTCACCCTGAGTCCACATTGAAGACTGCTGGAC    778
   240 G--R--L--V--Q--Q--G--R--S--S--H--P--E--S--T--L--K--T--A--G--    259

                                                                          
   781 CTACTGCTGCAAATTCAGCTGGGAATATCGAAAGTTGCTGGAGCAGAAGGAACCAGACTG    840
   779 CTACTGCTGCAAATTCAGCTGGGAATATCGAAAGTTGCTGGAGCAGAAGGAACCAGACTG    838
   260 P--T--A--A--N--S--A--G--N--I--E--S--C--W--S--R--R--N--Q--T--    279

                                                                          
   841 TTGAAGCAAAACCAGATAATGTGGATAATGGTCTTAGGGCAGCTTCCGTAACAGAAAAAA    900
   839 TTGAAGCAAAACCAGATAATGTGGATAATGGTCTTAGGGCAGCTTCCGTAACAGAAAAAA    898
   280 V--E--A--K--P--D--N--V--D--N--G--L--R--A--A--S--V--T--E--K--    299

                                                                          
   901 CTGAAGGAAATCCAAGTAGCTCAGAAACAAGACCAAAAGAAGTAGTTGAGTCTGTCCCTC    960
   899 CTGAAGGAAATCCAAGTAGCTCAGAAACAAGACCAAAAGAAGTAGTTGAGTCTGTCCCTC    958
   300 T--E--G--N--P--S--S--S--E--T--R--P--K--E--V--V--E--S--V--P--    319

                                                                          
   961 TTCAAAATCAAGCAGCTTCTCAGAAGCTCTTGCAGAAAATGAGCCATTCCAACCTGGATG   1020
   959 TTCAAAATCAAGCAGCTTCTCAGAAGCTCTTGCAGAAAATGAGCCATTCCAACCTGGATG   1018
   320 L--Q--N--Q--A--A--S--Q--K--L--L--Q--K--M--S--H--S--N--L--D--    339

                                                                          
  1021 GTCAACATTCTAGAGGTCGAAAATATAGGGGAAAGGGAAAACAAGAAGAGCCTGTGGTTT   1080
  1019 GTCAACATTCTAGAGGTCGAAAATATAGGGGAAAGGGAAAACAAGAAGAGCCTGTGGTTT   1078
   340 G--Q--H--S--R--G--R--K--Y--R--G--K--G--K--Q--E--E--P--V--V--    359

                                                                          
  1081 TGACTTTGGATGAGTGGGAAAAGAGGAAAGCTGGTGCAAGGCCTCAGATGAGAAACGAGC   1140
  1079 TGACTTTGGATGAGTGGGAAAAGAGGAAAGCTGGTGCAAGGCCTCAGATGAGAAACGAGC   1138
   360 L--T--L--D--E--W--E--K--R--K--A--G--A--R--P--Q--M--R--N--E--    379

                                                                          
  1141 TTCCTGAAACTAGTGGTGATGAAGATCTGGCTTGGCGGCTACAGACCCAACTGGATTTGG   1200
  1139 TTCCTGAAACTAGTGGTGATGAAGATCTGGCTTGGCGGCTACAGACCCAACTGGATTTGG   1198
   380 L--P--E--T--S--G--D--E--D--L--A--W--R--L--Q--T--Q--L--D--L--    399

                                                                          
  1201 AAGATTATCATGTACAAAGAATGCATGGCACAGAGGCAGAGAACATTAAAAGAAGTATGT   1260
  1199 AAGATTATCATGTACAAAGAATGCATGGCACAGAGGCAGAGAACATTAAAAGAAGTATGT   1258
   400 E--D--Y--H--V--Q--R--M--H--G--T--E--A--E--N--I--K--R--S--M--    419

                                                                          
  1261 TTAACTATGAAAGAGAGGATGGTAGAAATCGACAAGAGGAACGCGGAGGGAAAGGAAGGG   1320
  1259 TTAACTATGAAAGAGAGGATGGTAGAAATCGACAAGAGGAACGCGGAGGGAAAGGAAGGG   1318
   420 F--N--Y--E--R--E--D--G--R--N--R--Q--E--E--R--G--G--K--G--R--    439

                                                                          
  1321 GGAGGGGAAGGGGAAGGGGAAGAGGAAGAGGAAGGGGTAGAGGGAGGTTTGGCTAACCTT   1380
  1319 GGAGGGGAAGGGGAAGGGGAAGAGGAAGAGGAAGGGGTAGAGGGAGGTTTGGCTAA....   1374
   440 G--R--G--R--G--R--G--R--G--R--G--R--G--R--G--R--F--G--*-....    457

                                                                          
  1381 TTGTCCTCCTGTATATTATCTCTGCACTCGTCTTGTACAAGGCAACATTTTTGCTTATCC   1440
       ............................................................       
       ............................................................       

                                                                          
  1441 TTTTTTAATCTTTTTGCCTCTATTTATCATTTTTTAAAGCCCATGAGTCGCCATGCCCTT   1500
       ............................................................       
       ............................................................       

                                                                          
  1501 TCATCTTATTCCAAAAAAGCACAAAAAGGAAGACAAAGGATGATTCAAGCTTGCAACTTG   1560
       ............................................................       
       ............................................................       

                                                                          
  1561 GAAAACGAAATTACAATTCTTTTTATCACTTTCTTTTTTGCCGAAATGGGATTTTTCTTT   1620
       ............................................................       
       ............................................................       

                                                                          
  1621 TATTGATAGTTGATCTTCCTAAAGTCTCTAAGGCAGCTTCTTAGGTATTATTTTTTTTCT   1680
       ............................................................       
       ............................................................       

                                                                          
  1681 TTAGAGAAGAGGATTTGAACTCATACTTTTTATATAAAGAAATTATACATTAATCAATAA   1740
       ............................................................       
       ............................................................       

                                                                          
  1741 GTTAAATACTCAAGTCTATTATTGAATGTGTTTATTAAAATGATTAGTATCAAAGAGAAA   1800
       ............................................................       
       ............................................................       

                                                                          
  1801 GAGTTATAGTCAAAACTTAGAGGTTAGTTTTGATATCTCTATTTGTACTTAGGTACATCT   1860
       ............................................................       
       ............................................................       

                                                                          
  1861 CCTTCTATAAAGCTTTTCAATTGAAGGAATAAATATTATAATCTATATAAGTTGAATCAC   1920
       ............................................................       
       ............................................................       

                                                                          
  1921 AGTCCGCAATTAATAACCATGTTACTGTCATTTTAATATTACTCACCCGGTTGAACATAC   1980
       ............................................................       
       ............................................................       

                                                                          
  1981 AAAAAACTTGTTAGGGAAGTGTGGATATGGAATGCGTTAAACTAATTTCTTATTTAGAAG   2040
       ............................................................       
       ............................................................       

                                                                          
  2041 AAGAAAAATTAGGCCGGGAATATGACATTTAATTATATTGAACCGCACAAACACATTGAA   2100
       ............................................................       
       ............................................................       

                                                                          
  2101 TGGATTTCTGTGTATTGAACAATTAGGAGCCACTGAAAGACAGAGACCGGTGTTTAGGTG   2160
       ............................................................       
       ............................................................       

                                                                          
  2161 ACGACTGTATTGCAAGGAAATGGTTTGGAAAAAAAGAGTATCAAATTTATTATTTATGAA   2220
       ............................................................       
       ............................................................       

                                                                          
  2221 AAATATTTTTTTTTGGTAAAAATTTTAAAAAAGAGTTAGTAAGATTTATAAACTTTATTG   2280
       ............................................................       
       ............................................................       

                                                                          
  2281 TGAAATAAGAGAATTTGTTGAGAATCAAAAGCATTCTTAGTTTTATCAAAAATTCAGAAT   2340
       ............................................................       
       ............................................................       

                                                                          
  2341 GAGTAAGTATAAC                                                  2353
       .............                                                      
       .............