Theobroma cacao Matina 1-6 (Theobroma_cacao_20110822) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesGeneral identifiersOligo probesSupporting evidenceID HistoryTranscript historyProtein history.
Zinc finger family protein
Chromosome 4: 27,507,691-27,511,023 reverse strand.
This transcript has 5 exons and is annotated with 25 domains and features.
This transcript is a product of gene TCM_020255 Show transcript tableHide transcript table
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1 CCAGCCCAATCGTAAAATTCCCATCCTGCTCTTCTCTTTCTTTTCGTCGTCTACCACCAC 60 ............................................................ ............................................................ 61 AAATGGTGAACCCCACCATTGCCACCACCGCTCGCTCCAAAGTTCTCGGGTAACGCAACC 120 ............................................................ ............................................................ 121 TACCTCCGACAACAATCCCTTTCCTTCCCTCTACAGTGTTCGTAAGCCGCTGCAAGTCAG 180 ............................................................ ............................................................ 181 TCCACTGGTTTCTTTATCTTTCTCCATTATAAAGGTAACTAGGACTTGAGAATTTTAAAA 240 ............................................................ ............................................................ 241 TTTTTAATCCTTGTCTGTAGATTTTTAAATTTTATGATTCTGAGTCAAGTGATTCTTTTG 300 ............................................................ ............................................................ 301 TTTTCGATCTAGGGTTTGTTTTTCTTTTCTTTTGTGGTTTTAGAGATTTTAGACTTTTGA 360 ............................................................ ............................................................ 361 GGTAAAAAAAAAAACTTTTTTTGCCAAATTCATGAAAACTATAGTGAATCTAGTATAGTT 420 ............................................................ ............................................................ 421 TTATTCGAATTTTGGGTTATAAAATTATGAACTTCCATGTAATTTTTCACGGTGAAGTTG 480 ............................................................ ............................................................ 481 TTAATGATGTCTTTTTTATTTTGTCTCTTTGTTTTAGCTTTTGTGTTCTTGATGAAATTA 540 ............................................................ ............................................................ 541 ACATGTGCAATTATCAATGTAATTGTGGCTATAATGATGATTAGAACTGTAGAACGTGAT 600 ............................................................ ............................................................ 601 GACATATGATCCTTTTGAGTATCTTCTATCAGGAACCACTACAAATTATGAGTTTTAATT 660 ............................................................ ............................................................ 661 TCATTCTCATGACAGAAAGTGTGATCCTATCTATACAAATTATGTTATGACTATGATTAG 720 ............................................................ ............................................................ 721 TATTTTGATCATGGATCAATAGTCGGTTTACTTAATAGTAAAGATTTTAACTGATGTTAT 780 ............................................................ ............................................................ 781 TCTAAAACCTTCTTTCAGGTGATTGTAGCAACAATTGTGAGCAAATTGAAGTTCATCTTG 840 ............................................................ ............................................................ 841 CTTGACACAAGGAATCTATAAACCTTTGCTTTTGTTTCCATTAAGATGACAGATTCAAAT 900 .............................................ATGACAGATTCAAAT 15 .............................................-M--T--D--S--N- 5 901 GAGTCCCAGTATCCAGGAAAAGAACCACAGCAATCTGAAACAGAACCTCAGCAGTCTGAA 960 16 GAGTCCCAGTATCCAGGAAAAGAACCACAGCAATCTGAAACAGAACCTCAGCAGTCTGAA 75 6 -E--S--Q--Y--P--G--K--E--P--Q--Q--S--E--T--E--P--Q--Q--S--E- 25 961 CAAGTCTGCAATTTCTTTAGGAAGCCAACAAAGGGCAAAAACATAAGGAAAAGGACAATA 1020 76 CAAGTCTGCAATTTCTTTAGGAAGCCAACAAAGGGCAAAAACATAAGGAAAAGGACAATA 135 26 -Q--V--C--N--F--F--R--K--P--T--K--G--K--N--I--R--K--R--T--I- 45 1021 AACGAAGACGAAGATGAAGACTCCAGAAATGAAACATCTCTGTTGCAGAACCATAAAAAG 1080 136 AACGAAGACGAAGATGAAGACTCCAGAAATGAAACATCTCTGTTGCAGAACCATAAAAAG 195 46 -N--E--D--E--D--E--D--S--R--N--E--T--S--L--L--Q--N--H--K--K- 65 1081 ACTCTGAAGCCTGATAATAAGTTATACTTTTCAACTGGACCCTCCAAGAGTGCTGCTGCC 1140 196 ACTCTGAAGCCTGATAATAAGTTATACTTTTCAACTGGACCCTCCAAGAGTGCTGCTGCC 255 66 -T--L--K--P--D--N--K--L--Y--F--S--T--G--P--S--K--S--A--A--A- 85 1141 ACTGAATCAAATATAGAATCTGACAAACCAATTTTCCAATTTGAGTCTTCAAAGGAAATT 1200 256 ACTGAATCAAATATAGAATCTGACAAACCAATTTTCCAATTTGAGTCTTCAAAGGAAATT 315 86 -T--E--S--N--I--E--S--D--K--P--I--F--Q--F--E--S--S--K--E--I- 105 1201 CAAGTTCACAATGATAGCAGAGCAACAGCAACCTTAGAAACTGAGACTGAGGTTACAAAA 1260 316 CAAGTTCACAATGATAGCAGAGCAACAGCAACCTTAGAAACTGAGACTGAGGTTACAAAA 375 106 -Q--V--H--N--D--S--R--A--T--A--T--L--E--T--E--T--E--V--T--K- 125 1261 GATGCTCGAGCTATACGTGAGAAAGTTCTTAAACAATCAGAGGAGGTTTTGAAGGGGAAA 1320 376 GATGCTCGAGCTATACGTGAGAAAGTTCTTAAACAATCAGAGGAGGTTTTGAAGGGGAAA 435 126 -D--A--R--A--I--R--E--K--V--L--K--Q--S--E--E--V--L--K--G--K- 145 1321 AGCACAAGCTCTGGTGGAGAGAAGTTGTATAAAGGAATGCATGGTTATGTGGATCATAAG 1380 436 AGCACAAGCTCTGGTGGAGAGAAGTTGTATAAAGGAATGCATGGTTATGTGGATCATAAG 495 146 -S--T--S--S--G--G--E--K--L--Y--K--G--M--H--G--Y--V--D--H--K- 165 1381 GCGGGGTTTCGAAGAGAGCAAACAATTGCCAGTGAGAAAGCTGGTGGGTCACATGGACCT 1440 496 GCGGGGTTTCGAAGAGAGCAAACAATTGCCAGTGAGAAAGCTGGTGGGTCACATGGACCT 555 166 -A--G--F--R--R--E--Q--T--I--A--S--E--K--A--G--G--S--H--G--P- 185 1441 CTTAGGGCTTCTGCCCACATCAGGGTGTCAGCAAGATTTGATTATCAGCCAGATATCTGT 1500 556 CTTAGGGCTTCTGCCCACATCAGGGTGTCAGCAAGATTTGATTATCAGCCAGATATCTGT 615 186 -L--R--A--S--A--H--I--R--V--S--A--R--F--D--Y--Q--P--D--I--C- 205 1501 AAAGACTACAAAGAAACTGGTTACTGTGGTTACGGAGACTCATGTAAGTTTATGCATGAT 1560 616 AAAGACTACAAAGAAACTGGTTACTGTGGTTACGGAGACTCATGTAAGTTTATGCATGAT 675 206 -K--D--Y--K--E--T--G--Y--C--G--Y--G--D--S--C--K--F--M--H--D- 225 1561 CGCGGAGATTACAAGTCTGGGTGGCAGTTAGAGAAGGAGTGGGAAGAAGCAGAGAAAGCA 1620 676 CGCGGAGATTACAAGTCTGGGTGGCAGTTAGAGAAGGAGTGGGAAGAAGCAGAGAAAGCA 735 226 -R--G--D--Y--K--S--G--W--Q--L--E--K--E--W--E--E--A--E--K--A- 245 1621 AGGAAGAGAAATCTGGCTTTGGGTGGCGATGATGATGATGGGGCGGGGTTAAACCAGAGT 1680 736 AGGAAGAGAAATCTGGCTTTGGGTGGCGATGATGATGATGGGGCGGGGTTAAACCAGAGT 795 246 -R--K--R--N--L--A--L--G--G--D--D--D--D--G--A--G--L--N--Q--S- 265 1681 GATGATGATGATGATGATTCGTTACCCTTTGCATGTTTTATTTGCCGGCAGCCTTTTGTG 1740 796 GATGATGATGATGATGATTCGTTACCCTTTGCATGTTTTATTTGCCGGCAGCCTTTTGTG 855 266 -D--D--D--D--D--D--S--L--P--F--A--C--F--I--C--R--Q--P--F--V- 285 1741 GATCCTGTTGTTACTAAGTGCAAGCACTACTTCTGCGAGCATTGTGCTTTAAAGCATCAT 1800 856 GATCCTGTTGTTACTAAGTGCAAGCACTACTTCTGCGAGCATTGTGCTTTAAAGCATCAT 915 286 -D--P--V--V--T--K--C--K--H--Y--F--C--E--H--C--A--L--K--H--H- 305 1801 GCAAAGAATAAGAAGTGCTTTGTCTGCAACCAACCTACCCTTGGTATTTTTAATACTGCT 1860 916 GCAAAGAATAAGAAGTGCTTTGTCTGCAACCAACCTACCCTTGGTATTTTTAATACTGCT 975 306 -A--K--N--K--K--C--F--V--C--N--Q--P--T--L--G--I--F--N--T--A- 325 1861 CATGAGATACGTAGAAAGATGGCTGAAGAGGGAATGCTTTCACTGCTAGAGCTTGGCTAC 1920 976 CATGAGATACGTAGAAAGATGGCTGAAGAGGGAATGCTTTCACTGCTAGAGCTTGGCTAC 1035 326 -H--E--I--R--R--K--M--A--E--E--G--M--L--S--L--L--E--L--G--Y- 345 1921 CAACTTATTGTTCTTATAAAGTGTGGGAAAAAAAATCATCCTGTCTTCGTATATTTATTC 1980 1036 CAACTTATTGTTCTTATAAAGTGTGGGAAAAAAAATCATCCTGTCTTCGTATATTTATTC 1095 346 -Q--L--I--V--L--I--K--C--G--K--K--N--H--P--V--F--V--Y--L--F- 365 1981 CATAGTGTTTGCAATTGTTATGTTGTTCCTTTGACAATGTTCATCTGGTAACGGTAGTTC 2040 1096 CATAGTGTTTGCAATTGTTATGTTGTTCCTTTGACAATGTTCATCTGGTAA......... 1146 366 -H--S--V--C--N--C--Y--V--V--P--L--T--M--F--I--W--*-......... 381 2041 ATTTAACTCAGTACAGTGACTTTTAGAATAAAGTTATGGTCCCCCAAAACTCTTTTCTTC 2100 ............................................................ ............................................................ 2101 TTCCATTTTTTATTTTTTTCCCTTTTTATTTTTTTGGTAGTTCGCCTAATTCAAGTTATT 2160 ............................................................ ............................................................ 2161 TGGAATAAATGATTGTATTGTTATCATCACAATAGCATTTTTCTTTTATTTTTCCCCTTT 2220 ............................................................ ............................................................ 2221 CCATATTGAAACCAAGCTAGTGCAAGAGTTCAGACCTCATGCGGTTTGTTGGCATCATAC 2280 ............................................................ ............................................................ 2281 ATTGGTTGATCTGGTCAAGAATTTTATTGTTTTTCCCATTGAGAAATTTCAATAGATTTG 2340 ............................................................ ............................................................ 2341 ATGAATCCTAATTAATAACATTTCTATATGCATGGAGGGTCTGTTTTGTGCCCTTTCATT 2400 ............................................................ ............................................................ 2401 ATCTAATTATCTTTTTTCCCTCGATGTTCTTAATTACTTCTCATTTTTTTACTTTTGAAT 2460 ............................................................ ............................................................ 2461 AGGTTTTGACCTAGACTAAACATTTACCTACATATGTATGCCCGTTAAAACAGATTTGTT 2520 ............................................................ ............................................................ 2521 TGGTTGTTTCTTTAGTATCAAATGTATTTTAGCGGACTCCTGAATGTGGTTAACCATACA 2580 ............................................................ ............................................................ 2581 TGATAGGTTAGATTTTGGATTTTGGTTTCTCTGTATACATAAGTAATTGTATTTTCAAAT 2640 ............................................................ ............................................................ 2641 TGAATTGTCTTTGTCATTTAATTGTATACTTTAATCTTTTTTTATCTACGTAATAATAAA 2700 ............................................................ ............................................................ 2701 TTAACTTTTTTCTT 2714 .............. ..............
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Ensembl Plants release 61 - May 2025 © EMBL-EBI EMBL-EBI
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