Description
Ubiquitin related modifier 1
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- EOX96118 522 99aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
A0A061E1H8 - A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.html Ensembl Canonical,
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{"provisional":{"ref":{"style":[[0,""],[0,"background-color:#ffdf33;color:#1044ee"],[32,"333333"],[-12,"f9af;color:#1044ee"],[12,"333333"],[-11,"fff;color:#1044ee"],[11,"333333"],[-32,"color:#1044ee;background-color:#ffdf33"],[34,"f9af"],[1,"fff"],[-28,"333333"],[5,"3;background-color:#ffdf33"],[22,"f9af"],[1,"fff"]]},"expect":["variants","variants"],"flourishes":{},"seq":[{"style":[10]},-7,{"style":[10,-41,0]},{"style":[11,2,-47,6,-2,4,-2,6,-2,4]},{"style":[12,13,-2,12,-2,13,-2,12,-1,8,5,-2,3,-2,5,-2,3,-2,5,-2,3,-2,5,-2,3,-2,5,-2,3,-2,5,-2,3,-2,5,-2,3,-2,5,-2,3]},{"style":[8,9,-2,8,-2,9,-2,8,-2,9,-2,8,-2,9,-2,8,-2,9,-2,4,12,-1,13,-2,12,-2,13,-2,12,-2,13,-2,12,-2,13,-2,12,-2,13,-2,12]},{"style":[12,6,-2,12,-2,6,-2,12,-2,6,-2,12,-2,6,-2,12,-2,6,-2,12,-2,6,-2,12,-2,6,-2,12,-2,6,-2,12,-2,6,-1,9,8,-2,9,-2,8]},{"style":[3,5,-2,3,-2,5,-2,3,-2,5,-2,3,-2,5,-2,3,-2,5,-2,3,-2,5,-2,3,-2,5,-2,3,-2,5,-2,3,-2,5,-2,3,-2,5,-2,3]},{"style":[8,9,-2,8,-2,9,-2,8,-2,9,-2,8,-2,9,-2,8,-2,9,-2,8,-2,9,-2,8,-2,9,-2,8,-2,9,-2,8,-2,1]},{"style":[7]},-1,{"style":[7,-41,10,0]},{"style":[10]},-7,{"style":[10,-41,0]},{"style":[10]},-7,{"style":[10,-41,0]}],"legend":{"_messages":[],"exons":{"exon0":{"default":null,"class":"e0","config":"exon0","label":"#333333","text":"An exon"},"exon1":{"config":"exon1","label":"#1044ee","text":"Another exon","default":null,"class":"e1"}},"other":{"utr":{"label":null,"config":"utr","text":"UTR","default":"#ffdf33","class":"cu"}},"codons":{"c1":{"class":"c1","default":"#fff9af","text":"Alternating codons","label":null,"config":"c1"},"c0":{"default":"#ffffff","class":"c0","config":"c0","label":null,"text":"Alternating codons"}}}},"url":"/Theobroma_cacao/Component/Transcript/Sequence_cDNA/sequence?g=TCM_005444;r=1%3A36651157-36652256;t=EOX96118;db=core;time=1743743661188.188;adorn=only"}
1 GCAAAATCCCGAGTAAGGGTTTTTGAGTTTCTGCGGAAATTTGTTCAGAATGCAATTGAC 60
.................................................ATGCAATTGAC 11
.................................................-M--Q--L--T 4
61 TCTTGAGTTTGGTGGAGGTTTAGAACTGTTATGTGAATCTGTTAAAGTTCATAATGTGAA 120
12 TCTTGAGTTTGGTGGAGGTTTAGAACTGTTATGTGAATCTGTTAAAGTTCATAATGTGAA 71
4 --L--E--F--G--G--G--L--E--L--L--C--E--S--V--K--V--H--N--V--N 24
121 TATTGATCTCCCAAAAGGAGCAGATAAGTTAACCATGAGATATTTACTGTCTTGGGTTCG 180
72 TATTGATCTCCCAAAAGGAGCAGATAAGTTAACCATGAGATATTTACTGTCTTGGGTTCG 131
24 --I--D--L--P--K--G--A--D--K--L--T--M--R--Y--L--L--S--W--V--R 44
181 TACCGATTTGATCAAGGAGAGACCTGAAATGTTCATGAAAGGGGAGTCTGTGAGACCAGG 240
132 TACCGATTTGATCAAGGAGAGACCTGAAATGTTCATGAAAGGGGAGTCTGTGAGACCAGG 191
44 --T--D--L--I--K--E--R--P--E--M--F--M--K--G--E--S--V--R--P--G 64
241 TGTTCTTGTGCTAGTAAATGATTGTGACTGGGAGTTGACTGGTCAGCTTGACACAACCTT 300
192 TGTTCTTGTGCTAGTAAATGATTGTGACTGGGAGTTGACTGGTCAGCTTGACACAACCTT 251
64 --V--L--V--L--V--N--D--C--D--W--E--L--T--G--Q--L--D--T--T--L 84
301 GGAAGAGAAGGATGTGGTAGTTTTTATTTCAACATTGCATGGTGGATAGTATCTAGATGA 360
252 GGAAGAGAAGGATGTGGTAGTTTTTATTTCAACATTGCATGGTGGATAG........... 300
84 --E--E--K--D--V--V--V--F--I--S--T--L--H--G--G--*-........... 99
361 TTGTTACTATATCTTATAAACAATCGCGATGAAGAGGATATCAGAGTTTGGCATAGTTGT 420
............................................................
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421 AATGCCTCTGAACTGCATCGTTCAAGATATTATATGAAAGTGCAATGATATTTTTGGTGT 480
............................................................
............................................................
481 TTAAGTCCCATGTTCTTTTATTTTTATGCAATGGACTAATTT 522
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