Theobroma cacao Matina 1-6 (Theobroma_cacao_20110822) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesGeneral identifiersOligo probesSupporting evidenceID HistoryTranscript historyProtein history.
JHL03K20.1 protein isoform 1
Chromosome 1: 2,876,775-2,882,146 forward strand.
This transcript has 10 exons and is annotated with 18 domains and features.
This transcript is a product of gene TCM_000664 Show transcript tableHide transcript table
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1 CGCCGCAAATTTCGTTCTGAGTTGGGAGTCTTTGGAAGTTTCGACTATCAGTCTGTCACC 60 ............................................................ ............................................................ 61 GGCATCATTGTCTCCCTCGCTCCCTCTTTTGTCTGAACCAAACGTCGTAGTAGTTCACAA 120 ............................................................ ............................................................ 121 GAGAAGAACAATCTCGTGAACCGATGGTAAAAACTAGACAACAAAAATCCAAACCCAAGA 180 ............................................................ ............................................................ 181 AACAGCATCCCCAAGTAAGTTTCAGTAAATTCTTTTCTTTATGATCTTTGATCTTTTTCC 240 ............................................................ ............................................................ 241 TTTGTTGGTTTTTCTCAATTCAGTTTATAGTCTAGATTTGGATGTATGTAATTAACTTAA 300 ............................................................ ............................................................ 301 GCATGACAAAGTCATCAAGAATAAAGAAAAAGAAATTGCAGTAGATATCAATGTCCAATA 360 ............................................................ ............................................................ 361 ATAAAAAAGGGAAGGATAAAACAATGTTTACGTTGAATAAACATGCGAATTTTCTTTTTA 420 ............................................................ ............................................................ 421 TAGAAATCGTTCTTCGAATAGGTTTGCAGATGCAATTAGAGAATGCCGCTGGTAGAATGA 480 ............................................................ ............................................................ 481 CAGTTCAATTTAATGCTTTTAGTAGTAGGTTGTTTCTTCATCCTGAAATTAGTAATGCAA 540 ............................................................ ............................................................ 541 AAATCCCGTTTGGTGGACCAGGTAAAAAAGCAGGGAAAGCAGACAGATATTTCTCGGTTT 600 ............................................................ ............................................................ 601 CGTGCCCAGCTTGATGCATTGGGCCTACAAATCATCCAAGTGACTGCAGATGGTAATTGT 660 .................................................ATGGTAATTGT 11 .................................................-M--V--I--V 4 661 TTCTTCAGTTAGCAGGGCTCTTGCTGATCAGTTAGAAGGTGATGAGGAGCAACATGGAAA 720 12 TTCTTCAGTTAGCAGGGCTCTTGCTGATCAGTTAGAAGGTGATGAGGAGCAACATGGAAA 71 4 --S--S--V--S--R--A--L--A--D--Q--L--E--G--D--E--E--Q--H--G--K 24 721 ATATCGCAGCATGGTGGTACAATATATAGTGAAGAACCGTGAAATGTTTGAACCCTTTAT 780 72 ATATCGCAGCATGGTGGTACAATATATAGTGAAGAACCGTGAAATGTTTGAACCCTTTAT 131 24 --Y--R--S--M--V--V--Q--Y--I--V--K--N--R--E--M--F--E--P--F--I 44 781 CGAGGATGATGTCCCATTTGATGAATACTGTCAGTCCATGGAAAAGGACGGCACATGGGC 840 132 CGAGGATGATGTCCCATTTGATGAATACTGTCAGTCCATGGAAAAGGACGGCACATGGGC 191 44 --E--D--D--V--P--F--D--E--Y--C--Q--S--M--E--K--D--G--T--W--A 64 841 TGGACATATGGAACTACAGGCAGCTTCTCTTGTCATTCGCAGAAATATATGCATACATCG 900 192 TGGACATATGGAACTACAGGCAGCTTCTCTTGTCATTCGCAGAAATATATGCATACATCG 251 64 --G--H--M--E--L--Q--A--A--S--L--V--I--R--R--N--I--C--I--H--R 84 901 AAACATGTCGCCTCGCTGGTACATAAAGAATTTTGACGGACGTGGAGCTCTCATGGTCCA 960 252 AAACATGTCGCCTCGCTGGTACATAAAGAATTTTGACGGACGTGGAGCTCTCATGGTCCA 311 84 --N--M--S--P--R--W--Y--I--K--N--F--D--G--R--G--A--L--M--V--H 104 961 TTTATCATATCATGACGAGGAACACTACAACAGTGTAAGATTAAAAGAAGACCCCTGTAA 1020 312 TTTATCATATCATGACGAGGAACACTACAACAGTGTAAGATTAAAAGAAGACCCCTGTAA 371 104 --L--S--Y--H--D--E--E--H--Y--N--S--V--R--L--K--E--D--P--C--N 124 1021 CGGGCCAGCAATGCCAATTATTATTACGGCTGATGCTGATATCTCAGCGTCAACTAATCA 1080 372 CGGGCCAGCAATGCCAATTATTATTACGGCTGATGCTGATATCTCAGCGTCAACTAATCA 431 124 --G--P--A--M--P--I--I--I--T--A--D--A--D--I--S--A--S--T--N--Q 144 1081 AGCAAAAGCTGCAGTTAGCAAGCCGAAGGGGGCAGCTGGTAAGGACAGTAACAATACAGG 1140 432 AGCAAAAGCTGCAGTTAGCAAGCCGAAGGGGGCAGCTGGTAAGGACAGTAACAATACAGG 491 144 --A--K--A--A--V--S--K--P--K--G--A--A--G--K--D--S--N--N--T--G 164 1141 ATCAATCAAATTGGTATTGGCTGGAAGTGGTTGTGAAAGTGCTGAAAAAGTTGAACAGGT 1200 492 ATCAATCAAATTGGTATTGGCTGGAAGTGGTTGTGAAAGTGCTGAAAAAGTTGAACAGGT 551 164 --S--I--K--L--V--L--A--G--S--G--C--E--S--A--E--K--V--E--Q--V 184 1201 TTTGCTACAAGTAGATGGTGATGTTGATGCTGCTATAGAGTTTCTGGTAGCAGAACAAGG 1260 552 TTTGCTACAAGTAGATGGTGATGTTGATGCTGCTATAGAGTTTCTGGTAGCAGAACAAGG 611 184 --L--L--Q--V--D--G--D--V--D--A--A--I--E--F--L--V--A--E--Q--G 204 1261 AACTGAAGACTACGCAGCTGAAAATGATTCACTTACTTGTCATGTAGATGGTTCTTATGG 1320 612 AACTGAAGACTACGCAGCTGAAAATGATTCACTTACTTGTCATGTAGATGGTTCTTATGG 671 204 --T--E--D--Y--A--A--E--N--D--S--L--T--C--H--V--D--G--S--Y--G 224 1321 AAATGATGAAGATGTAAACAGTGAAAAACTCAAGCAAGAAGCTTTAAAGAAGACCTTTGA 1380 672 AAATGATGAAGATGTAAACAGTGAAAAACTCAAGCAAGAAGCTTTAAAGAAGACCTTTGA 731 224 --N--D--E--D--V--N--S--E--K--L--K--Q--E--A--L--K--K--T--F--E 244 1381 ACAGGATCCATCTAGTGATAGCATTAAAACTCTTGATGATAGCAGTTCTCGAAAAGATGA 1440 732 ACAGGATCCATCTAGTGATAGCATTAAAACTCTTGATGATAGCAGTTCTCGAAAAGATGA 791 244 --Q--D--P--S--S--D--S--I--K--T--L--D--D--S--S--S--R--K--D--D 264 1441 CAAGGTTTCATGCTATAAGATTCCAAGAAACAAGATCTGCCCTTGTGGGTCAAAGAAAAA 1500 792 CAAGGTTTCATGCTATAAGATTCCAAGAAACAAGATCTGCCCTTGTGGGTCAAAGAAAAA 851 264 --K--V--S--C--Y--K--I--P--R--N--K--I--C--P--C--G--S--K--K--K 284 1501 ATACAAGGCTTGTTGTGGATCAGTCTCGGGGAGGTCATCGACTAAGTTTATAGCTAACCA 1560 852 ATACAAGGCTTGTTGTGGATCAGTCTCGGGGAGGTCATCGACTAAGTTTATAGCTAACCA 911 284 --Y--K--A--C--C--G--S--V--S--G--R--S--S--T--K--F--I--A--N--Q 304 1561 AACAATGGATGCCAGAAAGGGTAGAAAGGTACAGAAACAAGGCAAGAAGGGAGCATCTGC 1620 912 AACAATGGATGCCAGAAAGGGTAGAAAGGTACAGAAACAAGGCAAGAAGGGAGCATCTGC 971 304 --T--M--D--A--R--K--G--R--K--V--Q--K--Q--G--K--K--G--A--S--A 324 1621 TAAATCTGCAGCATCCTCTGGATCTGATGGAGGGCCACCTGACATGGGTGCACTTTGCAT 1680 972 TAAATCTGCAGCATCCTCTGGATCTGATGGAGGGCCACCTGACATGGGTGCACTTTGCAT 1031 324 --K--S--A--A--S--S--G--S--D--G--G--P--P--D--M--G--A--L--C--I 344 1681 ATGACCTTAATATCATGTGATTGCCTGTGCCACTCTTGTTATCCTTGATTATTTTCTATT 1740 1032 ATGA........................................................ 1035 --*-........................................................ 344 1741 TTTTGCGAATTGATGCATAAGTGGGTATATTTTTTCATTCTAATCTTCCAATGAAAGTTG 1800 ............................................................ ............................................................ 1801 ATTTTCATTTTAGATGAGGAAGAAACTGCTGGTGTCAAGAAATAGCACTTATTGCAGAGA 1860 ............................................................ ............................................................ 1861 AATTTAAGCCATTTTATATTAGTTATCTGCTGATTATTTTGATCTATCTATGTAGGTCTC 1920 ............................................................ ............................................................ 1921 CTAGGTGCGATATTTTGGATCTTGTCCCCATGTGGCGCCAATCTGTTTCCCACTTTCAGG 1980 ............................................................ ............................................................ 1981 CAAGGGCTTATGCTGTGAGCCTCCGAAAAATGAATTTGAGTGCTCATGGCCTCGGTTGAT 2040 ............................................................ ............................................................ 2041 GCTCATGCATTTAATTGTTACGATTCCTCATCACATCCAAATATTAGCAGGACAAACAGG 2100 ............................................................ ............................................................ 2101 TTCTGCTTTTCAACTCCAGTTTATTTTGAGATTCGCTGTAAATGGGTCTCCATTCTTTGA 2160 ............................................................ ............................................................ 2161 CAAAAAGTGGGATTATACAACAGAGAATGATGAAGATGAAAAGAGAAGAAATAGGAATGG 2220 ............................................................ ............................................................ 2221 TACAGATTTTTGTTTAACATTTATTGAGCTTTGACAATTCTGAGAGTCAGTGACAGATTC 2280 ............................................................ ............................................................ 2281 ACGATGGTGACGAGCAACATTTGCTTCTTTTAGAAGCATAGAAGGTATCATTGTAAGGGT 2340 ............................................................ ............................................................ 2341 ATGATTATAGTAAACGGATGTATAACTGTCTTGTTCACGCATATGGAATATGTACATTCA 2400 ............................................................ ............................................................ 2401 ATGATGTGAGTGTTTTATTCCTCCTGCAAGTCATTTTTGAATGAATC 2447 ............................................... ...............................................
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Ensembl Plants release 61 - May 2025 © EMBL-EBI EMBL-EBI
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