Theobroma cacao Matina 1-6 (Theobroma_cacao_20110822) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesGeneral identifiersOligo probesSupporting evidenceID HistoryTranscript historyProtein history.
Set domain protein, putative isoform 5
Chromosome 8: 4,794,103-4,803,002 forward strand.
This transcript has 15 exons and is annotated with 26 domains and features.
This transcript is a product of gene TCM_034786 Show transcript tableHide transcript table
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Transmembrane helices predicted by TMHMM.
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Signal peptide cleavage sites predicted by SignalP.
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Protein domains and motifs from the PIR (Protein Information Resource) Superfamily database.
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Protein domains and motifs from the PROSITE patterns database.
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Structure-Function Linkage Database families.
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HAMAP families.
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Protein domains and motifs from the TIGRFAM database.
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Protein fingerprints (groups of conserved motifs) from the PRINTS database.
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NCBIfam is a collection of protein families based on Hidden Markov Models (HMMs).
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ProDom domains.
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Coiled-coil regions predicted by Ncoils.
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Intrinsically disordered regions predicted by MobiDB lite.
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Low complexity peptide sequences identified by Seg.
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Protein features that represent the mapping between Ensembl proteins (ENSP) and AlphaFoldDB protein structures (including their corresponding chains). Imported via UniProt mappings
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Protein domains and motifs from the SUPERFAMILY database.
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Protein domains and motifs from the SMART database.
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Protein domains and motifs from the Pfam database.
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Protein domains and motifs from the PROSITE profiles database.
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PANTHER families.
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CATH/Gene3D families.
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Conserved Domain Database models.
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Ave. residue weight: 111.606 g/mol
Charge: 33.5
Isoelectric point: 8.4538
Molecular weight: 138,503.01 g/mol
Number of residues: 1,241 aa
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Ensembl Plants release 61 - May 2025 © EMBL-EBI EMBL-EBI
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