Theobroma cacao Matina 1-6 (Theobroma_cacao_20110822) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesGeneral identifiersOligo probesSupporting evidenceID HistoryTranscript historyProtein history.
RING-H2 finger C1A, putative
Chromosome 5: 18,371,552-18,374,096 reverse strand.
This transcript has 1 exon and is annotated with 15 domains and features.
This transcript is a product of gene TCM_023780 Show transcript tableHide transcript table
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| No. | Exon / Intron | Start | End | Start Phase | End Phase | Length | Sequence |
|---|---|---|---|---|---|---|---|
| 5' upstream sequence |
..........attgaagataggagagacgagatgttccattatgtaactccaaccccttc
| ||||||
| 1 | EOY08709-1 | 18,374,096 | 18,371,552 | 0 | 0 | 2,545 |
TATCAAAGTCAGCAGGCTGAGCGGGTGAGCCCAACTAGCTTCGGCGTCAGCCCAAATAAA TATCAGTACCACCACGTGTAATTTGGGATAAACGATAAATACGGATTTTCTTTTTAATTT TATAATTTTCGGTGAAATGAAACAAACATTACACACACAAGGCTGTCTTTGAACTTGCCC CCCACAAAGAAAAGGGAAGGAAATCCCCAAAATTTCCATAGTATTCATTTTCTCTCTCTT TGGGAAAAGTCATCTTTGATCTCCTCAAGGTTCGTCCATAATTTTCTCATCTCTCATCTC TTCAATCTGGTTTGATTGCTCTCATGATTTCCTTCCATGTCTTCCTCTCTGTATTTCTGT AAAATTTGTTGTATTTTGTATTGAAGAATTTATGAAGAAAACCCCTTTTTTTGTCCAACT TCATTCGAACTGATCAATTTGAGCTAAAGAAGGTTTTATTGTGTGGTTTTTGGGTGTACG GGGTTGAAATAATTGCTTGATCTGAGTTTGGACTCGTCCAAACTCAGACTCAACTGTTCA GGATCATTGGATTTTCTTTTGTTTTCTGGATTGCTTACTGTGTAGTTAAATTCAATTATT TGTTTGAAGAAAACAGTCTTGAAAGAACGAGATTTATATAAATTGAACGTGAAAATGGAA AACCCTTTTGTCCGCCTTCATTTACTTTGTTTGGATTGAGCTCAGCCAGTGAAAATTTAT CTCAAAACTAAACAAAAATCAATTTACTTTTAGCATTTCATTTTTATGGTAAAGATAATA ATTTTATTAATTCAAAAAAGGAAAAGAAAGGATGATAATTTCATTTCTTTTTGCTTTAAA ATTAAATCCCAAGTATTTTTGCTGGATTTTTTTGTGTATTTGTCCAATTTGCACATTCAA AGGGTAGAAAGAACCAAAAGAAAAAATTTTTAACAATGTTTTAGTTATGAAGAATCACTT CACTGTCGATTCTGATTCTTGTACTTGGTTGTAATATCAAGTGGTTTGACTTAGGGAAGC CCTTCCTCTGTGTGTGTATGTTTGTTTGTATGCATTCTTTAAACATGAAGAGAAAGTAGT ATGACTCAATTGATGGTTGTAATGCATAATTTCTAGGGAACTGCATGTATCTTCATATGC TTGGTTCAATTAAAGAAAACCCTATGATTCTTTTAAGTCTTTGAAGTGGACATAAGCCAT TAAAGATAATCAAAAGTTCATATTGATTACCACTTTGCTGATTGTAATCAGTTTTGCTGA TAAAATAGCTAATTGAGGAGTCTGCAAGATTATTTGTGCATTTTTCTTTTCAGACTTTCT CAAAGAGAGGGCAATGTCAACTGGAAGAAATACCCATTGGTGTTATAGATGCAGGCGACC AGTTCTCCTTCAAGGGCGTGATGCAGTTTGCTGCTATTGTCGTGGGGGATTTGTCCAAGA ACTAGACGATATGGTGCATATCAGTCCTCTGGATTTTTTTGGACTAGATGGTGATGAAGA TCGCATCCAAAGGTTTGGTCTCATGGATGCTTTTTCTGCCTTAATGAGGCAGCGACTAGC TGACAGAAATTTTAACCATAATATCAGGGGAAGAACAGATTCAATTCCTGAGAACACTTC ACCATTTGGTCCCTTATTGATTTTTGGTGGTCAAATTCCTTTTAGGTTGTCTGGGAATGG TGGGTTTGAAGCTCTTTTTAATGGGGCACCTGGAATTGGTTTTACACGAGGTAATGCTGG AGATTATTTTATAGGTCCTGGGTTAGAAGAATTGTTTGAACAGCTCTCGGCTAATGATCG TAGGGGCCCTCCCCCGGCATCCCGATCTTCAATTGATGCAATGCCTACCATTAAGATTTC ACGAAGGCATCTTCATTCTGATTCACACTGTCCTGTTTGCAAAGATAAATTTGAACTGGG ATCTGAAGCAAGACAAATGCCATGCAACCATATATATCATTCGGATTGTATCATCCCATG GCTGGAGCAGCACAACTCGTGTCCTGTTTGTCGACAAGAATTGCCACCACAAGGACCAGG TAGCAGCCGCAATTATCACTCAAGTGGTCAAAGTAGTAGCAGCAGTTTGGGAACTAATTC CAGTGGAAGGGAGAGTAGGGAGAATCACAGTAGACGGAATCCGTTCTCATATTTCTGGCC ATTCCGTTCGTCTAATTCTAGCTCTAGCCATAATGGAGCTGCTGGAAGCAGTTCCCCGAG TGTACACGAGAACAACCACTCGATGGGATATAGTGGATGGCCTTTTGACTGAGGTCTGTA TTTTAGGGACATGATTTCTTTCTGTTCTGTTGTGATCATAAGTCCTCAATTATGCTTTAC AAATTACTTGGATTGGAAGTGGTTTGCGATCCTAGAGTCTTCTGAGAGTCAGTGTAAAAG TAATTGAGGTCAACTTCGTCCAGCAACTTGTGTAAATGACTCTTTCCCTTGGTGGCGAGT ATTTGTGTTTTAAATGTTAAATGGATGTTGCGAATGAGTATGCTCAGAAGGGTAGGTTAC TATCACCTAGAAAGGAAAAATTACA |
| 3' downstream sequence |
atcagaaataaatatctttagttaataattgtactctcagtagataaggc..........
|
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Ensembl Plants release 60 - October 2024 © EMBL-EBI EMBL-EBI
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