Theobroma cacao Matina 1-6 (Theobroma_cacao_20110822) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesGeneral identifiersOligo probesSupporting evidenceID HistoryTranscript historyProtein history.
DREB2A-interacting protein 2 isoform 3
Chromosome 1: 30,218,131-30,224,698 reverse strand.
This transcript has 7 exons and is annotated with 15 domains and features.
This transcript is a product of gene TCM_004200 Show transcript tableHide transcript table
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| No. | Exon / Intron | Start | End | Start Phase | End Phase | Length | Sequence |
|---|---|---|---|---|---|---|---|
| 5' upstream sequence |
..........tcccataatctccccttctccttaatctcaaccccttttctccttccttt
| ||||||
| 1 | EOX94564-1 | 30,224,698 | 30,224,300 | 0 | 1 | 399 |
CAGATCAACACATTCCCATCTCGCTCTCGCTCTCTCTCTTATGCACCTATATCTCTTAGC TTTCAGTCCCGTCTCCTATCGACCTCTCTGTTTGTAATCCTTCTTCTTTCTAGTATTTCT GTCATGGGTTTAATGCAGGTTTTTATGAAGATGTGCACGTAAAATTCCTTCGCTTTCTTC TTGTCATTGACATGCAGTGAGAGGATACGTGCGAAGGGGTTGAGATTGAGAGAGAGAGGG CGAAGCTAAACAAGAAACAAAAAAAAGAAATAAAAGAAAGAGAGATGGCGAATCAGGTGG TTAAAGTGAAGAGAGAAGCGATTGCGGCATGCATGACTTGTCCTCTTTGCAATAAGCTTC TAAGAGATGCCACCACCATATCTGAATGTCTTCACACGT |
| Intron 1-2 | 30,224,299 | 30,223,506 | 794 |
gtgagtctcctgagatttctctctc..........aatttgtcttttgaattttatgtag
| |||
| 2 | EOX94565-2 | 30,223,505 | 30,223,406 | 1 | 2 | 100 |
TTTGCAGAAAGTGCATATATGATAAGATACAAGAGGAAGAACTAGAATGCTGTCCGATAT GCAACACTGATTTGGGTTGTGTCCCTCTGGAGAAATTAAG |
| Intron 2-3 | 30,223,405 | 30,222,551 | 855 |
gtattctcttacatattattctcct..........acacatctgtgcttttgataatcag
| |||
| 3 | EOX94565-3 | 30,222,550 | 30,222,217 | 2 | 0 | 334 |
GCCAGACCATAATTTGCAAGATGTGAGGGCCAAAATCTTCCCTCTTAAAAGAAGAAAAGT GAAGGCACCTGAAATTGTGCCCCCAGTTACAGTGCCAACTAGAAGAAAGGAGAGATCACT CTCTTCGTTGGTGGTTAATGCCCCCAAAGTATCCACACAAACTACCATGACCGGAAGGAG AACAAAAGCTGTTGCCAGAAAGTCTGGTGCTTTACGAGGTTCCAGTTTTTCAATAGAGAA GCCTGTAAAAAGAGAGGAAGACTCTATGGAGGATCACCAGGAGAGTGCAAGCTCACCTGA AACACTAAATAAATTCACTCAGAATAAAAGACAG |
| Intron 3-4 | 30,222,216 | 30,222,053 | 164 |
gtataaggaagcaaacatatttttt..........tgtcattctttcaaattgaacacag
| |||
| 4 | EOX94565-4 | 30,222,052 | 30,221,610 | 0 | 2 | 443 |
TGTACTTCTTCTGCTGAACCTAGCCAACATATGAATAAAGAAGCAGAGAATGGTGGAGAA TCATGGGACGGAAAATTGGATCTCTGGAAACCTTTGAATTGTTTGGTGGAGGTTGCAAAT AGGACCAAGACTTTCAAGTCTAATTCACAAGGCTCTGATTCTAAGTTAGAACCTAGTCGT GTTGCCAGCAGTGAAGCTCAAATGTGCAAAAGCAAACATAGGGAAGACAAATGCAAAACA AAGATTGAGGATGAAAAGAATAGTGCTGGTCCTGCCACTTCAGAAGCTGTAAATCCTAAA AAGTTACGCAGGATCCGTCGAAAAAGGGCTTCTGGATTTGGGGATTCTGGCATTTCTCCA CAAGCTGTGCTAGATGCTGCTGGTACAGAGCATGACAGAAGAGTCGGTCCTGTTTGGTTC TCATTAGTGGCCTCTGAGGACCA |
| Intron 4-5 | 30,221,609 | 30,221,511 | 99 |
gtaagaattgatttcagccttcttt..........ctaattcaaatgtcaatgctttcag
| |||
| 5 | EOX94565-5 | 30,221,510 | 30,221,460 | 2 | 2 | 51 |
GGAAGGAGAGGCGCCCCTCCCTCAAATTCCTGCAAATTACTTAAGGATAAA
|
| Intron 5-6 | 30,221,459 | 30,219,704 | 1,756 |
gtaagttccttttggcaattcttct..........tcatacttctttcattctgttacag
| |||
| 6 | EOX94565-6 | 30,219,703 | 30,219,631 | 2 | 0 | 73 |
GGATGGAAATATACCTGTTTCTTTTATCCAAAAATACCTTATGAAGAAACTGGATCTCAC TGATGAAGCTGAG |
| Intron 6-7 | 30,219,630 | 30,218,713 | 918 |
gtgagttaacctctccctgaatgtt..........tccttgtcacttttcttttgggcag
| |||
| 7 | EOX94564-7 | 30,218,712 | 30,218,131 | 0 | 0 | 582 |
GTTGCGATCAAATGTATGGGACAACCCGTGGTTCCCACGTTGCACTTGTATAATTTAGTC GATTTGTGGCTACAAACAGCATCAACATCACAGCGAGTACCTGCATCTGTTGGTTCCTCT GCAAAAGATTTTGTCATGGTGTTAGGGTATGCTCGAAAAATCCCAGATCAATAATGATGC TTTCTTTCATTCTTTGCCCACCACAGCAATAATCTATAAATATGTATCCTTCTTTGAATC TCATTGGTATTTTGATCCGGCATGTATTTTTATAAAAGCATCCATTCACTGAGTTGGTTC TTCTACAATAGTTTCTTTCATTCTCTACCTACAAATAGAGCGGTGTATGCAGCTAAGTAC TGGGATTAGCTATCCTGACAGCATTGGCATGGTGTCGGAGTTCATGCTATGCCATTGTGA CTGACGTGGTTAATAGCTGCATGTCATTGAACTTGCAAGTCTCAGATTGTATTATCAATA TACATTCGCAAATGGTAGATTTTTTTTTTCATTGTTTGCAGTTAGTTTGATGTAAAATTT TCTCATGTTTCGACCCCGAATAGAACCCTTACCCTTTGCTCT |
| 3' downstream sequence |
caatgaccaactgcctcagcagtaggctttgttaatgcaagtgttattat..........
|
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Ensembl Plants release 61 - May 2025 © EMBL-EBI EMBL-EBI
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