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    Theobroma cacao Matina 1-6 (Theobroma_cacao_20110822) ▼

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    Transcript: EOX91507

    Description

    Sumo conjugation enzyme 1

    Location

    Chromosome 1: 2,931,246-2,934,600 reverse strand.

    About this transcript

    This transcript has 5 exons and is annotated with 9 domains and features.

    Gene

    This transcript is a product of gene TCM_000671 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtFlags
    -EOX915071004160aa
     
    Protein coding
    		A0A061DH55 Ensembl Canonical

    Exons

    Download sequence
    Exons/ Introns
    • Translated sequence
    • Flanking sequence
    • Intron sequence
    • UTR
    Markup
    • loading
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    • No.
    • Exon / Intron
    • Start
    • End
    • Start Phase
    • End Phase
    • Length
    • Sequence
    Download what you seeDownload whole table
    No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
    5' upstream sequence 
    ..........aaactttaatattttattataaaccgatagacatgaaaaagacaacgtac
    1EOX91507-12,934,6002,934,18800413 
    CCTTGGGATTGGGACCCATCTTATTTATTCCGCCTCCCTCCTGATCAAATCTCGACCGTA
CGCTCCCCTTTGTCAACTCTGCGAAACGAAACAACGCTTCACCTTCTCAAGGGCATAACC
GGAATAAAAGAATATATAATAATTCTTTTTCTTTTTCTTTTTTTTTAATTTTTAGACGAT
GAAGAAAAAACGATAAAGGCAATTCCAATTCCATTCTACTTTCCAATTTTCCACTCTTTT
GTCTTTCTTTAATCTTTATTTATAAATTTTTTATCTTTTAAGAGTGAGAAAGAGGGAACG
ATTGCAAGTGAGAGGGTTTTAGAGAGAGAAAGAGAGATATAGAGATGTCGGGAGGAATAG
CGCGTGGACGACTCGCCGAGGAACGGAAGGCATGGAGGAAGAATCATCCTCAT
     Intron 1-22,934,1872,934,088100 
    gtccgtacagtttgtttttcttttt..........attttttttgttgttgtaattttag
    2EOX91507-22,934,0872,934,0040084 
    GGTTTTGTTGCGAAGCCAGAGACGTTGCAGGATGGAACGGTGAATTTGATGGTGTGGCAT
TGCACCATCCCTGGCAAAGCAGGG
     Intron 2-32,934,0032,932,1161,888 
    gtaagtcaaagattctctttagttc..........actccttgcatcatctatgttacag
    3EOX91507-32,932,1152,931,96300153 
    ACTGATTGGGAGGGCGGTTATTTCCCACTTACACTCCACTTCAGTGAAGATTATCCTAGC
AAGCCTCCAAAGTGTAAATTTCCACAAGGTTTTTTTCATCCAAATGTTTACCCATCTGGT
ACTGTTTGCCTCTCAATCCTAAATGAGGATAGT
     Intron 3-42,931,9622,931,861102 
    gtaagtatattcctctgatcttgat..........gcccattcttgtgttgtgtacatag
    4EOX91507-42,931,8602,931,74700114 
    GGTTGGAGACCAGCCATAACCGTGAAGCAGATTCTTGTGGGTATCCAGGATTTGCTGGAT
GCTCCAAATCCTGCTGATCCTGCACAAACTGAAGGCTACCACCTCTTCATCCAG
     Intron 4-52,931,7462,931,486261 
    gtatgtttcttaagtttttcttctt..........catataatctcttttccttgtgcag
    5EOX91507-52,931,4852,931,24600240 
    GATGCTAATGAATATAAGAGAAGGGTTCGCCAGCAAGCCAAGCAGTACCCACCTCTGGTC
TAGTGTTATTAAAATACTAGATTGTCCTTGACATTTCTGGTAAAATGCCGGCTGGCTGCC
TCCTGTATAATGCTAGACTCGCTTCTCCTAGAGAAAGCCTTTGGTATTTGGTAATTGTCA
GTTACCTGACTGTGTAAACTGTATGAAACCAGCTTTTGCGCTCATCAGATTTGGATAATG
    3' downstream sequence 
    gcggtttatatactatttagacttgtaacttgcaagtggaaaactgtgaa..........

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