Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: EOY33855

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Description

Uncharacterized protein isoform 1

Location

Chromosome 9: 39,173,940-39,178,985 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 40 domains and features.

Gene

This transcript is a product of gene TCM_041704 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	EOY33851	6623	1408aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061GWQ5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	EOY33856	6806	975aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061GWJ2	-	-
-	EOY33853	6623	1408aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061GWQ5	-	-
-	EOY33854	5222	1358aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061GZY7	-	-
-	EOY33852	5093	1408aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061GWQ5	-	-
-	EOY33855	4319	1345aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061GVH7	-	-
-	EOY33850	3981	1326aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061GVH4	-	-
-	EOY33857	3439	972aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061GXE1	-	-

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	1	1320	-	PTHR37393	-
Superfamily	16	64	-	SSF57850	-
CDD	18	57	-	cd16449	-
Superfamily	84	141	-	SSF49599	-
PROSITE profiles	20	59	Zinc finger, RING-type	PS50089	IPR001841 [Display all genes with this domain]
PROSITE patterns	37	46	Zinc finger, RING-type, conserved site	PS00518	IPR017907 [Display all genes with this domain]
Gene3D	8	118	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	144	207
MobiDBLite	146	193
MobiDBLite	194	207
MobiDBLite	276	442
MobiDBLite	286	329
MobiDBLite	352	374
MobiDBLite	382	418
MobiDBLite	428	442
MobiDBLite	477	535
MobiDBLite	499	509
MobiDBLite	583	595
MobiDBLite	583	615
MobiDBLite	598	608
MobiDBLite	637	717
MobiDBLite	665	688
MobiDBLite	692	702
MobiDBLite	750	780
MobiDBLite	764	780
MobiDBLite	831	845
MobiDBLite	831	989
MobiDBLite	895	904
MobiDBLite	957	969
Seg	146	193
Seg	218	260
Seg	277	303
Seg	309	329
Seg	352	374
Seg	382	447
Seg	498	509
Seg	580	595
Seg	605	616
Seg	957	969
Ncoils	729	749

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