Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: EOY30409

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Description

Regulatory protein isoform 1

Location

Chromosome 9: 4,535,000-4,540,252 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 21 domains and features.

Gene

This transcript is a product of gene TCM_037633 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	EOY30409	2515	591aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061GTE3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	EOY30410	2206	454aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061GKK4	-	-

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
CDD	46	188	-	cd18310	-
PROSITE profiles	326	351	-	PS50297	-
SMART	263	291	Ankyrin repeat	SM00248	IPR002110 [Display all genes with this domain]
SMART	292	322	Ankyrin repeat	SM00248	IPR002110 [Display all genes with this domain]
Pfam	294	324	Ankyrin repeat	PF00023	IPR002110 [Display all genes with this domain]
PROSITE profiles	326	351	Ankyrin repeat	PS50088	IPR002110 [Display all genes with this domain]
SMART	326	355	Ankyrin repeat	SM00248	IPR002110 [Display all genes with this domain]
Gene3D	261	385	Ankyrin repeat-containing domain superfamily	1.25.40.20	IPR036770 [Display all genes with this domain]
Superfamily	264	368	Ankyrin repeat-containing domain superfamily	SSF48403	IPR036770 [Display all genes with this domain]
Pfam	62	137	BTB/POZ domain	PF00651	IPR000210 [Display all genes with this domain]
PROSITE profiles	66	138	BTB/POZ domain	PS50097	IPR000210 [Display all genes with this domain]
SMART	66	188	BTB/POZ domain	SM00225	IPR000210 [Display all genes with this domain]
Pfam	368	572	NPR1/NIM1-like, C-terminal	PF12313	IPR021094 [Display all genes with this domain]
PANTHER	5	578	Regulatory protein NPR	PTHR46475	IPR044292 [Display all genes with this domain]
Pfam	225	269	Regulatory protein NPR, central domain	PF11900	IPR024228 [Display all genes with this domain]
Gene3D	40	222	SKP1/BTB/POZ domain superfamily	3.30.710.10	IPR011333 [Display all genes with this domain]
Superfamily	47	187	SKP1/BTB/POZ domain superfamily	SSF54695	IPR011333 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	562	591
MobiDBLite	564	578
Seg	564	578
Alphafold	1	591

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