Theobroma cacao Matina 1-6 (Theobroma_cacao_20110822)
Description

Transcription factor jumonji domain-containing protein, putative isoform 2

Location
About this transcript

This transcript has 14 exons and is annotated with 20 domains and features.

Gene

This transcript is a product of gene TCM_033531 Show transcript tableHide transcript table

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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
-EOY14240317041056aa
 
Protein coding
A0A061FA87 -Ensembl Canonical
-EOY1424136191051aa
 
Protein coding
A0A061FB52 --
-EOY142422680738aa
 
Protein coding
A0A061FC17 --

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
Gene3D493791-2.60.120.650-
Superfamily5051053-SSF51197-
Gene3D8011030-2.60.120.650-
CDD9451005-cd02208-
PANTHER1001055Histone demethylase JHDM2-likePTHR12549IPR045109 [Display all genes with this domain]
SMART6081021JmjC domainSM00558IPR003347 [Display all genes with this domain]
PROSITE profiles6271021JmjC domainPS51184IPR003347 [Display all genes with this domain]
Pfam9061004JmjC domainPF02373IPR003347 [Display all genes with this domain]
PROSITE profiles2369WRC domainPS51667IPR014977 [Display all genes with this domain]
Pfam2464WRC domainPF08879IPR014977 [Display all genes with this domain]
PROSITE profiles192238Zinc finger, RING-typePS50089IPR001841 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
MobiDBLite63181
MobiDBLite125134
MobiDBLite743791
MobiDBLite755766
MobiDBLite769790
Seg177189
Seg755770
Seg826840
Alphafold11056