Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: EOY26846

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Description

Pex2/Pex12 N-terminal domain-containing protein / zinc finger family protein isoform 2

Location

Chromosome 6: 18,722,832-18,727,657 reverse strand.

About this transcript

This transcript has 8 exons and is annotated with 12 domains and features.

Gene

This transcript is a product of gene TCM_028828 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	EOY26846	2042	345aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061GB89	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	EOY26847	1034	344aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061GCH2	-	-

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
ProDom	46	309	-	PD124462	-
Superfamily	277	331	-	SSF57850	-
CDD	284	328	Peroxisome biogenesis factor 2, HC subclass-RING finger domain	cd16526	IPR045859 [Display all genes with this domain]
PANTHER	12	343	Peroxisome biogenesis factor 2/10	PTHR48178	IPR025654 [Display all genes with this domain]
Pfam	59	266	Pex, N-terminal	PF04757	IPR006845 [Display all genes with this domain]
PROSITE profiles	284	325	Zinc finger, RING-type	PS50089	IPR001841 [Display all genes with this domain]
PROSITE patterns	300	309	Zinc finger, RING-type, conserved site	PS00518	IPR017907 [Display all genes with this domain]
Gene3D	259	343	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

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Feature type
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Filter

Feature type	Start	End
Seg	26	37
Seg	250	257
Seg	270	283
Alphafold	1	345

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