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    Theobroma cacao Matina 1-6 (Theobroma_cacao_20110822) ▼

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    Transcript: EOY26695

    Description

    Coatomer, beta' subunit isoform 8

    Location

    Chromosome 6: 17,403,133-17,412,371 reverse strand.

    About this transcript

    This transcript has 24 exons and is annotated with 35 domains and features.

    Gene

    This transcript is a product of gene TCM_028674 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • RefSeq
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
    -EOY266974028916aa
     
    Protein coding
    		A0A061GAW8 -Ensembl Canonical
    -EOY2670335226864aa
     
    Protein coding
    		A0A061GBE5 --
    -EOY266995886868aa
     
    Protein coding
    		A0A061GI27 --
    -EOY267024375912aa
     
    Protein coding
    		A0A061GC59 --
    -EOY266983983901aa
     
    Protein coding
    		A0A061GBE0 --
    -EOY267013586916aa
     
    Protein coding
    		A0A061GAW8 --
    -EOY266952751916aa
     
    Protein coding
    		A0A061GAW8 --
    -EOY266962463820aa
     
    Protein coding
    		A0A061GAW4 --
    -EOY267002250749aa
     
    Protein coding
    		A0A061GA34 --

    Domains & features

    Domains

    Show/hide columns
    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
    Download what you seeDownload whole table
    Domain sourceStartEndDescriptionAccessionInterPro
    CDD17297-cd00200-
    PROSITE profiles95127-PS50294-
    PROSITE profiles138172-PS50294-
    PROSITE profiles181218-PS50294-
    PROSITE profiles225256-PS50294-
    CDD304779-cd22947-
    Gene3D590798-1.25.40.470-
    PIRSF2884Coatomer beta' subunit (COPB2)PIRSF005567IPR016453 [Display all genes with this domain]
    PANTHER2715Coatomer complex subunitPTHR19876IPR050844 [Display all genes with this domain]
    Pfam319763Coatomer, WD associated regionPF04053IPR006692 [Display all genes with this domain]
    Prints158172G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Prints202216G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Prints244258G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    SMART443WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam1543WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    SMART4685WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    SMART88127WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam91127WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles95127WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART131171WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam133171WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles138180WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART174215WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam177215WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles181224WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART218257WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam220256WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles225266WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    Superfamily3297WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
    Superfamily227492WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
    Gene3D11300WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]

    Other features

    Show/hide columns
    • Feature type
    • Start
    • End
    Download what you seeDownload whole table
    Feature typeStartEnd
    MobiDBLite858873
    MobiDBLite858916
    Seg697708
    Alphafold1916

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