Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Custom tracks

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Transcript: EOY06422

.

Description

CHY-type/CTCHY-type/RING-type Zinc finger protein isoform 2

Location

Chromosome 4: 31,864,913-31,870,087 reverse strand.

About this transcript

This transcript has 12 exons and is annotated with 14 domains and features.

Gene

This transcript is a product of gene TCM_021148 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	EOY06422	1518	260aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061EPZ4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	EOY06423	1521	221aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061EP40	-	-

.

Domains & features

.

Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	10	253	-	PTHR21319	-
Superfamily	145	196	-	SSF57850	-
Gene3D	219	255	-	2.20.28.10	-
Pfam	193	251	RCHY1, zinc-ribbon	PF14599	IPR039512 [Display all genes with this domain]
Pfam	146	188	Zinc finger, C3HC4 RING-type	PF00097	IPR018957 [Display all genes with this domain]
PROSITE profiles	4	79	Zinc finger, CHY-type	PS51266	IPR008913 [Display all genes with this domain]
Pfam	11	84	Zinc finger, CHY-type	PF05495	IPR008913 [Display all genes with this domain]
Superfamily	7	80	Zinc finger, CHY-type superfamily	SSF161219	IPR037274 [Display all genes with this domain]
PROSITE profiles	81	145	Zinc finger, CTCHY-type	PS51270	IPR017921 [Display all genes with this domain]
Superfamily	82	139	Zinc finger, CTCHY-type superfamily	SSF161245	IPR037275 [Display all genes with this domain]
SMART	146	188	Zinc finger, RING-type	SM00184	IPR001841 [Display all genes with this domain]
PROSITE profiles	146	189	Zinc finger, RING-type	PS50089	IPR001841 [Display all genes with this domain]
Gene3D	130	218	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

Show/hide columns

Feature type
Start
End

Download what you see Download whole table

Filter

Feature type	Start	End
Alphafold	1	260

.

Personal Data