Theobroma cacao Matina 1-6 (Theobroma_cacao_20110822) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesGeneral identifiersOligo probesSupporting evidenceID HistoryTranscript historyProtein history.
RING/U-box superfamily protein
Chromosome 4: 30,609,927-30,618,255 reverse strand.
This transcript has 1 exon and is annotated with 13 domains and features.
This transcript is a product of gene TCM_020868 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| CDD | 132 | 175 | - | cd16461 | - |
| Superfamily | 132 | 181 | - | SSF57850 | - |
| PANTHER | 27 | 350 | RING-H2 finger protein ATL1/ATL16-like | PTHR46913 | IPR044600 [Display all genes with this domain] |
| Pfam | 132 | 175 | Zinc finger, RING-type | PF13639 | IPR001841 [Display all genes with this domain] |
| SMART | 133 | 174 | Zinc finger, RING-type | SM00184 | IPR001841 [Display all genes with this domain] |
| PROSITE profiles | 133 | 175 | Zinc finger, RING-type | PS50089 | IPR001841 [Display all genes with this domain] |
| Gene3D | 92 | 181 | Zinc finger, RING/FYVE/PHD-type | 3.30.40.10 | IPR013083 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| Phobius | 1 | 39 |
| Phobius | 40 | 63 |
| Phobius | 64 | 354 |
| Seg | 325 | 345 |
| TMHMM | 42 | 64 |
| Alphafold | 1 | 354 |
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Ensembl Plants release 61 - May 2025 © EMBL-EBI EMBL-EBI
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