Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: EOX91963

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Description

Ubiquitin-specific protease 17, putative isoform 2

Location

Chromosome 1: 4,652,175-4,657,415 reverse strand.

About this transcript

This transcript has 8 exons and is annotated with 19 domains and features.

Gene

This transcript is a product of gene TCM_000999 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	EOX91962	3469	941aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DI82	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	EOX91963	2945	623aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DPS4	-	-

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	57	108	-	6.10.140.2220	-
Superfamily	63	110	-	SSF144232	-
Gene3D	421	622	-	3.90.70.10	-
Superfamily	431	614	Papain-like cysteine peptidase superfamily	SSF54001	IPR038765 [Display all genes with this domain]
Pfam	432	570	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	PF00443	IPR001394 [Display all genes with this domain]
PANTHER	313	613	Ubiquitin carboxyl-terminal hydrolases	PTHR24006	IPR050164 [Display all genes with this domain]
PROSITE profiles	432	623	Ubiquitin specific protease domain	PS50235	IPR028889 [Display all genes with this domain]
PROSITE patterns	433	448	Ubiquitin specific protease, conserved site	PS00972	IPR018200 [Display all genes with this domain]
Pfam	68	105	Zinc finger, MYND-type	PF01753	IPR002893 [Display all genes with this domain]
PROSITE patterns	68	105	Zinc finger, MYND-type	PS01360	IPR002893 [Display all genes with this domain]
PROSITE profiles	68	105	Zinc finger, MYND-type	PS50865	IPR002893 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
MobiDBLite	296	311
MobiDBLite	296	374
MobiDBLite	326	374
Seg	2	23
Seg	296	308
Seg	331	345
TMHMM	2	24
Alphafold	1	623

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