Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: EOX90812

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Description

Senescence/dehydration-associated protein-related isoform 3

Location

Chromosome 1: 701,754-705,503 reverse strand.

About this transcript

This transcript has 7 exons and is annotated with 8 domains and features.

Gene

This transcript is a product of gene TCM_000181 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	EOX90812	1614	537aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DFP6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	EOX90813	2000	438aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DLG8	-	-
-	EOX90815	1918	386aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DFB5	-	-
-	EOX90814	1868	467aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DF85	-	-

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Pfam	268	377	Senescence/spartin-associated, C-terminal	PF06911	IPR009686 [Display all genes with this domain]
Pfam	447	525	Senescence/spartin-associated, C-terminal	PF06911	IPR009686 [Display all genes with this domain]
PANTHER	1	528	Spartin-like	PTHR21068	IPR045036 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
MobiDBLite	1	28
Seg	155	171
Seg	489	501
Seg	511	537
Alphafold	1	537

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