Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TCM_034659

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Description

Pre-mRNA-processing protein 40A isoform 8

Location

Chromosome 8: 4,176,141-4,187,314 forward strand.

About this gene

This gene has 8 transcripts (splice variants), 164 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	EOY15663	3975	1041aa	EOY15663	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061FFL7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	EOY15661	4475	1032aa	EOY15661	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061FG70	-	-
-	EOY15662	3948	1032aa	EOY15662	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061FG70	-	-
-	EOY15667	3364	787aa	EOY15667	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061FG73	-	-
-	EOY15666	2742	774aa	EOY15666	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061FF75	-	-
-	EOY15665	2715	904aa	EOY15665	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061FEF2	-	-
-	EOY15664	2535	844aa	EOY15664	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061FMH1	-	-
-	EOY15668	2401	789aa	EOY15668	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061FFM2	-	-

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Summary

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