Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TCM_016403

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Description

Ubiquitin ligase protein cop1, putative isoform 1

Location

Chromosome 3: 32,745,745-32,754,079 reverse strand.

About this gene

This gene has 9 transcripts (splice variants), 189 orthologues and 38 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	EOY24947	3312	1103aa	EOY24947	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061G6X9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	EOY24941	5362	1067aa	EOY24941	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061G5T1	-	-
-	EOY24949	5046	834aa	EOY24949	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061GD20	-	-
-	EOY24943	4953	1067aa	EOY24943	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061G5T1	-	-
-	EOY24942	4950	1082aa	EOY24942	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061G6X3	-	-
-	EOY24945	4950	1066aa	EOY24945	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061G508	-	-
-	EOY24946	4114	1083aa	EOY24946	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061G5T7	-	-
-	EOY24948	3309	1102aa	EOY24948	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061G6A2	-	-
-	EOY24944	3204	1067aa	EOY24944	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061G5T1	-	-

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Summary

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