Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: TCM_007621

.

Description

Histone deacetylase 1 isoform 1

Location

Chromosome 2: 7,947,289-7,951,720 forward strand.

About this gene

This gene has 7 transcripts (splice variants), 195 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	EOX98961	2711	499aa	EOX98961	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061E3N0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	EOX98962	2610	499aa	EOX98962	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061E3N0	-	-
-	EOX98963	2598	495aa	EOX98963	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061E1N4	-	-
-	EOX98964	2334	495aa	EOX98964	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061E1N4	-	-
-	EOX98965	2001	429aa	EOX98965	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061E1X0	-	-
-	EOX98966	2001	429aa	EOX98966	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061E1X0	-	-
-	EOX98967	1694	429aa	EOX98967	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061E1X0	-	-

.

Summary

.

.