Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: TCM_020439

.

Description

CLIP-associated protein, putative isoform 1

Location

Chromosome 4: 28,569,568-28,582,008 reverse strand.

About this gene

This gene has 6 transcripts (splice variants), 243 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	EOY05437	4859	1404aa	EOY05437	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061EM28	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	EOY05440	4757	1260aa	EOY05440	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061EK64	-	-
-	EOY05438	4487	1258aa	EOY05438	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061EL82	-	-
-	EOY05442	4232	1019aa	EOY05442	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061EM33	-	-
-	EOY05439	4223	1262aa	EOY05439	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061ET03	-	-
-	EOY05441	3894	1297aa	EOY05441	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061EKQ5	-	-

.

Summary

.

.