Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TCM_004856

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Description

Pre-mRNA-splicing factor ATP-dependent RNA helicase isoform 3

Location

Chromosome 1: 33,780,285-33,784,420 forward strand.

About this gene

This gene has 11 transcripts (splice variants), 135 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	EOX95334	3046	746aa	EOX95334	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DRA5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	EOX95340	2980	546aa	EOX95340	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DRJ8	-	-
-	EOX95332	2654	725aa	EOX95332	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DSE6	-	-
-	EOX95336	2481	683aa	EOX95336	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DTB7	-	-
-	EOX95337	2333	545aa	EOX95337	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DSF1	-	-
-	EOX95338	1907	572aa	EOX95338	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DZ92	-	-
-	EOX95335	1882	546aa	EOX95335	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DRJ8	-	-
-	EOX95333	1789	555aa	EOX95333	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DZ89	-	-
-	EOX95341	1781	538aa	EOX95341	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DTC1	-	-
-	EOX95342	1674	557aa	EOX95342	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DSF6	-	-
-	EOX95339	1635	544aa	EOX95339	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DRA9	-	-

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Summary

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