Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TCM_027212

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Description

Pre-mRNA-processing-splicing factor isoform 1

Location

Chromosome 6: 2,301,724-2,318,288 reverse strand.

About this gene

This gene has 4 transcripts (splice variants) and 269 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	EOY25843	12336	2354aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061GFM4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	EOY25846	7476	2007aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061G8E2	-	-
-	EOY25844	7065	2354aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061GFM4	-	-
-	EOY25845	6620	2126aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061G7K9	-	-

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Pan-taxonomic Compara

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Genomic alignments (Not available)

Gene tree (Not available)

Orthologues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data