Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TCM_022204

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Description

ATPase, AAA-type, CDC48 protein isoform 1

Location

Chromosome 5: 3,118,482-3,142,221 reverse strand.

About this gene

This gene has 2 transcripts (splice variants), 322 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	EOY07883	21800	805aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061ETA0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	EOY07884	2820	638aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061F041	-

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Pan-taxonomic Compara

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Genomic alignments (Not available)

Gene tree (Not available)

Orthologues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data