Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TCM_000127

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Description

DNA-directed RNA polymerase II subunit RPB1 isoform 1

Location

Chromosome 1: 506,233-516,288 reverse strand.

About this gene

This gene has 5 transcripts (splice variants), 289 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	EOX90742	7679	1861aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DGE8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	EOX90743	6310	1861aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DGE8	-	-
-	EOX90741	5586	1861aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DGE8	-	-
-	EOX90744	5346	1511aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DF51	-	-
-	EOX90745	4807	1512aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DF84	-	-

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Pan-taxonomic Compara

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Genomic alignments (Not available)

Gene tree (Not available)

Orthologues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data