Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TCM_000798

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Description

Plant U-box 49 isoform 6

Location

Chromosome 1: 3,539,151-3,546,459 forward strand.

About this gene

This gene has 6 transcripts (splice variants), 152 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	EOX91688	3317	692aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DP35	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	EOX91692	4011	595aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DH57	-	-
-	EOX91689	3240	542aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DH11	-	-
-	EOX91691	3146	532aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DIL1	-	-
-	EOX91690	3099	595aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DH57	-	-
-	EOX91693	2409	551aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061DP38	-	-

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External references

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This gene corresponds to the following database identifiers:

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External database	Database identifier
Expression Atlas	TCM_000798 [view all locations]

The following database identifiers correspond to the transcripts of this gene:

Transcript ID
EOX91692
EOX91693
EOX91688
EOX91691
EOX91689
EOX91690

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