Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: TCM_019010

.

Description

Auxin transport protein (BIG) isoform 1

Location

Chromosome 4: 19,566,776-19,602,472 forward strand.

About this gene

This gene has 2 transcripts (splice variants) and 160 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	EOY03819	30105	5136aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061ENC5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	EOY03818	30102	5135aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061EGP2	-	-

.

Literature

.

Showing the top 1 hits from Europe PubMed Central

Filter

PubMed ID	Title	Authors	Journal
26366857	Genome-Wide Transcriptome Analysis of Cotton (Gossypium hirsutum L.) Identifies Candidate Gene Signatures in Response to Aflatoxin Producing Fungus Aspergillus flavus.	Bedre R, Rajasekaran K, Mangu VR, Sanchez Timm LE, Bhatnagar D, Baisakh N.	PLoS One 10 (9) 2015

.

Personal Data