Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TCM_008341

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Description

Otubain, Ubiquitin thioesterase Otubain, Peptidase C65, otubain isoform 1

Location

Chromosome 2: 12,764,764-12,769,799 forward strand.

About this gene

This gene has 8 transcripts (splice variants) and 238 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	EOX99619	1641	335aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061E3L4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	EOX99622	2473	303aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061E5K2	-	-
-	EOX99616	2324	303aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061E5K2	-	-
-	EOX99621	2321	268aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061E5K9	-	-
-	EOX99620	1869	303aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061E5K2	-	-
-	EOX99623	1715	228aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061EBG4	-	-
-	EOX99618	1517	322aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061EBF6	-	-
-	EOX99617	912	303aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061E5K2	-	-

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Plant Compara

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data