Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TCM_012263

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Description

Histone deacetylase 15 isoform 1

Location

Chromosome 3: 1,883,146-1,893,689 reverse strand.

About this gene

This gene has 4 transcripts (splice variants), 161 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	EOY20940	3760	580aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061FTY6 A0AB32VBL8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	EOY20941	3111	416aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061FUK6	-
-	EOY20943	2966	421aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061FV25	-
-	EOY20942	2927	417aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061FVP2	-

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Plant Compara

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data